RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 FAM109AQ8N4B1 249 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 DNAJC5GQ8N7S2 189 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 B3GALNT2Q8NCR0 500 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 ACTRT2Q8TDY3 377 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 TFAP2BQ92481 460 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 ANKS1AQ92625 1134 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 TIFAQ96CG3 184 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 OSBPL9Q96SU4 736 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 ACTRT3Q9BYD9 372 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 DPH1Q9BZG8 443 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 BHMT2Q9H2M3 363 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 SLITRK6Q9H5Y7 841 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 SMURF2Q9HAU4 748 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 CHPF2Q9P2E5 772 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 TMX2Q9Y320 296 aa4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU4-48P-201ENST00000365559 ADGRA2Q96PE1 1338 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 A0A087WWL8 130 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 TMEM233B4DJY2 109 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 ADM5C9JUS6 153 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 KIAA0355O15063 1070 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 MPPED1O15442 326 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZBED1O96006 694 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 THP07101 528 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 ATXN1LP0C7T5 689 aaKnown RBP4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 EN2P19622 333 aaPredicted RBP4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 BMP5P22003 454 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 VIPR2P41587 438 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 CLK3P49761 638 aaKnown RBP4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 MAPK10P53779 464 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 LILRA4P59901 499 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 PRR16Q569H4 304 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZNF783Q6ZMS7 281 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 CCDC149Q6ZUS6 474 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 SLC15A4Q8N697 577 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 SIMC1Q8NDZ2 872 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 OR6B3Q8NGW1 331 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 SLC9A6Q92581 669 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 MAML1Q92585 1016 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 FAM136AQ96C01 138 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 PGBD1Q96JS3 809 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 PDLIM2Q96JY6 352 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 SERHLQ9NQF3 203 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 STK32BQ9NY57 414 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 LRIT1Q9P2V4 623 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 CPNE7Q9UBL6 633 aa4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 POLR2AP24928 1970 aaKnown RBP4.01□□□□□ -1.77
RNU4-48P-201ENST00000365559 WDR27A2RRH5 827 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 PPM1DO15297 605 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 HRGP04196 525 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 ELFN1P0C7U0 828 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 PXNP49023 591 aaPredicted RBP4□□□□□ -1.77
RNU4-48P-201ENST00000365559 PTH2RP49190 550 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 RARRES1P49788 294 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 SUMO3P55854 103 aaPredicted RBP4□□□□□ -1.77
RNU4-48P-201ENST00000365559 LOXL3P58215 753 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 NXPH1P58417 271 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 PURAQ00577 322 aaKnown RBP4□□□□□ -1.77
RNU4-48P-201ENST00000365559 SP2Q02086 613 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 ITIH3Q06033 890 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 SLC13A2Q13183 592 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 PTPRRQ15256 657 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 TXNRD1Q16881 649 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 KIAA0753Q2KHM9 967 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 RNF220Q5VTB9 566 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 KAZNQ674X7 775 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 LMBRD2Q68DH5 695 aaPredicted RBP4□□□□□ -1.77
RNU4-48P-201ENST00000365559 LAYNQ6UX15 382 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 SRGAP1Q7Z6B7 1085 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 PEG10Q86TG7 708 aaKnown RBP4□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZNF280BQ86YH2 543 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 LRTOMTQ8WZ04 291 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 PRDM13Q9H4Q3 707 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 PRDM11Q9NQV5 511 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 KLC4Q9NSK0 619 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 C11orf21Q9P2W6 132 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 DKK3Q9UBP4 350 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 TPCN1Q9ULQ1 816 aa4□□□□□ -1.77
RNU4-48P-201ENST00000365559 hCG_1984214I3L0E3 225 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 MYO1CO00159 1063 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 GOLIM4O00461 696 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 FRS3O43559 492 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 TBC1D4O60343 1298 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 NUDT3O95989 172 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 BRAFP15056 766 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 RHCEP18577 417 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 CACNB3P54284 484 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 INHBEP58166 350 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 RHDQ02161 417 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 EIF2B5Q13144 721 aaKnown RBP3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZIK1Q3SY52 487 aaPredicted RBP3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 ZNF362Q5T0B9 420 aaPredicted RBP3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 ARHGAP40Q5TG30 622 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 ICE2Q659A1 982 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 PPP4R4Q6NUP7 873 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 DARS2Q6PI48 645 aaKnown RBP3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 DGKHQ86XP1 1220 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 MPP5Q8N3R9 675 aa3.99□□□□□ -1.77
RNU4-48P-201ENST00000365559 RFKQ969G6 155 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms