RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 YTHDF3Q7Z739 585 aaKnown RBP9.67□□□□□ -0.86
CALD1-202ENST00000361901 TMEM192Q8IY95 271 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 TEX9Q8N6V9 391 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 HIC2Q96JB3 615 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 BEGAINQ9BUH8 593 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 TRAIPQ9BWF2 469 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 DNAI2Q9GZS0 605 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 NIF3L1Q9GZT8 377 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 MINDY3Q9H8M7 445 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 MRPL47Q9HD33 250 aaKnown RBP9.67□□□□□ -0.86
CALD1-202ENST00000361901 DAAM1Q9Y4D1 1078 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 A8MXQ7 604 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 SART1O43290 800 aaKnown RBP9.67□□□□□ -0.86
CALD1-202ENST00000361901 E2F6O75461 281 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 CCND1P24385 295 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 ARL2P36404 184 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 PSMD6Q15008 389 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 PPP1R15BQ5SWA1 713 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 LDLRAD1Q5T700 205 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 ENOSF1Q7L5Y1 443 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 TMEM130Q8N3G9 435 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 ACO2Q99798 780 aaKnown RBP9.67□□□□□ -0.86
CALD1-202ENST00000361901 ATP8A1Q9Y2Q0 1164 aa9.67□□□□□ -0.86
CALD1-202ENST00000361901 SMNDC1O75940 238 aaKnown RBP eCLIP9.66□□□□□ -0.86
CALD1-202ENST00000361901 TMCC1O94876 653 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 KRT1P04264 644 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 NFICP08651 508 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 ITGA4P13612 1032 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 PSMA2P25787 234 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 CTNNA1P35221 906 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 ADCY8P40145 1251 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 ELF3P78545 371 aaPredicted RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 COG7P83436 770 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 CFAP157Q5JU67 520 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 JADE1Q6IE81 842 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 PLPPR4Q7Z2D5 763 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 MAP7D3Q8IWC1 876 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 HSPH1Q92598 858 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 RMDN2Q96LZ7 410 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 MCEEQ96PE7 176 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 TRIM51Q9BSJ1 452 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 DDX23Q9BUQ8 820 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 CDT1Q9H211 546 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 GGT7Q9UJ14 662 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 LSM1O15116 133 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 TTI1O43156 1089 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 GAS2O43903 313 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 SHOX2O60902 331 aaPredicted RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 ELNP15502 786 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
CALD1-202ENST00000361901 C16orf87Q6PH81 154 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 TSHZ1Q6ZSZ6 1077 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 LCA5Q86VQ0 697 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 VSIG1Q86XK7 387 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.66□□□□□ -0.86
CALD1-202ENST00000361901 AGAP11Q8TF27 550 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 A0A0B4J269 797 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 KIAA0391O15091 583 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 IFNAR2P48551 515 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 CARSP49589 748 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 CPT1AP50416 773 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 SREBF2Q12772 1141 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 SMTNL2Q2TAL5 461 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 CDCA2Q69YH5 1023 aaPredicted RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 ZC3H18Q86VM9 953 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 BRSK2Q8IWQ3 736 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 ARHGAP18Q8N392 663 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 RNF34Q969K3 372 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 FAM81BQ96LP2 452 aa9.66□□□□□ -0.86
CALD1-202ENST00000361901 ELAC2Q9BQ52 826 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 NIFKQ9BYG3 293 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 MTRF1LQ9UGC7 380 aaKnown RBP9.66□□□□□ -0.86
CALD1-202ENST00000361901 HMGB1P1B2RPK0 211 aaPredicted RBP9.65□□□□□ -0.86
CALD1-202ENST00000361901 DAPK3O43293 454 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ARF4P18085 180 aaPredicted RBP9.65□□□□□ -0.86
CALD1-202ENST00000361901 MFSD10Q14728 455 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 IQSEC1Q6DN90 963 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 EMBQ6PCB8 327 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ZPBP2Q6X784 338 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 GALNT15Q8N3T1 639 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 SHCBP1Q8NEM2 672 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 BEST2Q8NFU1 509 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ZNF516Q92618 1163 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 P3H4Q92791 437 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 PCDHB18PQ96TA0 734 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 DPP3Q9NY33 737 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 C17orf102A2RUQ5 167 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 CFAP73A6NFT4 308 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 IGF2BP3O00425 579 aaKnown RBP eCLIP9.65□□□□□ -0.86
CALD1-202ENST00000361901 RAD51CO43502 376 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 THPOP40225 353 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 FLT3LGP49771 235 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ARPP19P56211 112 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 PTENP60484 403 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 DR1Q01658 176 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 ARHGAP1Q07960 439 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 MTM1Q13496 603 aa9.65□□□□□ -0.86
CALD1-202ENST00000361901 FSCN1Q16658 493 aaKnown RBP9.65□□□□□ -0.86
CALD1-202ENST00000361901 ZACNQ401N2 412 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms