RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 FHDC1Q9C0D6 1143 aaPredicted RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 TDRD3Q9H7E2 651 aaKnown RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 LIN28AQ9H9Z2 209 aaKnown RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 A0A0J9YVX5 310 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 I3L4J1 428 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF862O60290 1169 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ARP10275 920 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 SHMT1P34896 483 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 PDK3Q15120 406 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 XKR9Q5GH70 373 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 PRR5LQ6MZQ0 368 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 NOP9Q86U38 636 aaKnown RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ULK2Q8IYT8 1036 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 PYROXD1Q8WU10 500 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 POMGNT1Q8WZA1 660 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 PANX3Q96QZ0 392 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 MECRQ9BV79 373 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 RANBP17Q9H2T7 1088 aaKnown RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 BTBD7Q9P203 1132 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 hCG_1984214I3L0E3 225 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 MMP10P09238 476 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ECE1P42892 770 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF713Q8N859 430 aaPredicted RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ICA1LQ8NDH6 482 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 C7orf43Q8WVR3 580 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 CATSPER2Q96P56 530 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 PRPF18Q99633 342 aaKnown RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 NAP1L4Q99733 375 aaKnown RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 PFDN4Q9NQP4 134 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 COL4A1P02462 1669 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 DDTLA6NHG4 134 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-201ENST00000361716 XPO1O14980 1071 aaKnown RBP13.31□□□□□ -0.28
VAMP1-201ENST00000361716 TPD52L2O43399 206 aaKnown RBP13.31□□□□□ -0.28
VAMP1-201ENST00000361716 SORBS2O94875 1100 aaKnown RBP13.31□□□□□ -0.28
VAMP1-201ENST00000361716 GRIA2P42262 883 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 CDK16Q00536 496 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 PEX6Q13608 980 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 MRPL1Q9BYD6 325 aaKnown RBP13.31□□□□□ -0.28
VAMP1-201ENST00000361716 DCLK3Q9C098 648 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 LZTS1Q9Y250 596 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 CASZ1Q86V15 1759 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 CAPN8A6NHC0 703 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 HPCAP84074 193 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 UBAP2LQ14157 1087 aaKnown RBP13.31□□□□□ -0.28
VAMP1-201ENST00000361716 PLA2G4FQ68DD2 849 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 C11orf63Q6NUN7 778 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 TUBB6Q9BUF5 446 aa13.31□□□□□ -0.28
VAMP1-201ENST00000361716 PSMC3IPQ9P2W1 217 aaPredicted RBP13.31□□□□□ -0.28
VAMP1-201ENST00000361716 PEX1O43933 1283 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 ZMPSTE24O75844 475 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 SLITRK3O94933 977 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 GAP43P17677 238 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 PSMD7P51665 324 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 HIC1Q14526 733 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 ATP13A4Q4VNC1 1196 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 KLC3Q6P597 504 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 C1orf228Q6PIY5 440 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 TSHZ1Q6ZSZ6 1077 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 C3orf62Q6ZUJ4 267 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 RHPN2Q8IUC4 686 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 MORC4Q8TE76 937 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 LRRC19Q9H756 370 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 SLC7A8Q9UHI5 535 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 TESPA1A2RU30 521 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-201ENST00000361716 ONECUT3O60422 494 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-201ENST00000361716 POLR2MP0CAP2 368 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 ALAS1P13196 640 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 VCLP18206 1134 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 TM4SF1P30408 202 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 NSFP46459 744 aaKnown RBP13.3□□□□□ -0.28
VAMP1-201ENST00000361716 ORC2Q13416 577 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-201ENST00000361716 RASA3Q14644 834 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 SH3D19Q5HYK7 790 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF720Q7Z2F6 126 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 H0YIN7 160 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 HNRNPCL1O60812 293 aaKnown RBP13.3□□□□□ -0.28
VAMP1-201ENST00000361716 ANXA13P27216 316 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 YWHAGP61981 247 aaKnown RBP eCLIP13.3□□□□□ -0.28
VAMP1-201ENST00000361716 PPIDQ08752 370 aaKnown RBP13.3□□□□□ -0.28
VAMP1-201ENST00000361716 KIF22Q14807 665 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 DPY19L2P1Q6NXN4 242 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 B3GNT6Q6ZMB0 384 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 TTC25Q96NG3 672 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 TCHPQ9BT92 498 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 KANSL3Q9P2N6 904 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 CNTNAP4Q9C0A0 1308 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 BTAF1O14981 1849 aa13.3□□□□□ -0.28
VAMP1-201ENST00000361716 HNRNPDLO14979 420 aaKnown RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 EIF2AK2P19525 551 aaKnown RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 PMLP29590 882 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 MSX2P35548 267 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 SFSWAPQ12872 951 aaKnown RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 C16orf72Q14CZ0 275 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 SIX1Q15475 284 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms