RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 PPCSQ9HAB8 311 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 XPNPEP3Q9NQH7 507 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 UXTQ9UBK9 157 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 VPS51Q9UID3 782 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 F8W810 466 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 FKBP9O95302 570 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 NTSR2O95665 410 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 PGK2P07205 417 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 MAP1SQ66K74 1059 aaPredicted RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 RETSATQ6NUM9 610 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 TAF2Q6P1X5 1199 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 SARM1Q6SZW1 724 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 FKBP9P1Q75LS8 142 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 RFWD2Q8NHY2 731 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 AHCYL2Q96HN2 611 aaKnown RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 TARS2Q9BW92 718 aaKnown RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 NMRK2Q9NPI5 230 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 RPRD1BQ9NQG5 326 aaKnown RBP11.42□□□□□ -0.58
CLIP1-203ENST00000361654 UNC13AQ9UPW8 1703 aa11.42□□□□□ -0.58
CLIP1-203ENST00000361654 LARGE1O95461 756 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 DNAJB2P25686 324 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 PTGER2P43116 358 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 POU4F1Q01851 419 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 TMEM199Q8N511 208 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 PCYOX1LQ8NBM8 494 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 TNIP2Q8NFZ5 429 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 SPIRE2Q8WWL2 714 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 CPA5Q8WXQ8 436 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 OSBPL10Q9BXB5 764 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 LIMA1Q9UHB6 759 aaKnown RBP11.41□□□□□ -0.58
CLIP1-203ENST00000361654 USP27XA6NNY8 438 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 BMP10O95393 424 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 ATP1A3P13637 1013 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 CYP11B2P19099 503 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 RHOAP61586 193 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 DAB2P98082 770 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 SMAD1Q15797 465 aaKnown RBP11.41□□□□□ -0.58
CLIP1-203ENST00000361654 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 FAM9CQ8IZT9 166 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 CGRRF1Q99675 332 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 CAPN10Q9HC96 672 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 PNKPQ96T60 521 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 VPS33BQ9H267 617 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 TASP1Q9H6P5 420 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 RPS6KB2Q9UBS0 482 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 ABCC3O15438 1527 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 USP31Q70CQ4 1352 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 KIF1BO60333 1816 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 IKBKEQ14164 716 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 USP50Q70EL3 339 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-203ENST00000361654 ANO5Q75V66 913 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 ZNF507Q8TCN5 953 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.41□□□□□ -0.585e-7■■■■■ 48.1
CLIP1-203ENST00000361654 PARD6BQ9BYG5 372 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 FRMD8Q9BZ67 464 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-203ENST00000361654 IGFLR1Q9H665 355 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 MPP6Q9NZW5 540 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 M0QYT0 321 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 GRAP2O75791 330 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 WEE2P0C1S8 567 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 RPA1P27694 616 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 CASP1P29466 404 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 UBA3Q8TBC4 463 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 RBBP8Q99708 897 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 FOXP3Q9BZS1 431 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 TRIM9Q9C026 710 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 ZCCHC2Q9C0B9 1178 aaKnown RBP11.41□□□□□ -0.58
CLIP1-203ENST00000361654 OSGEPL1Q9H4B0 414 aa11.41□□□□□ -0.58
CLIP1-203ENST00000361654 TLR8Q9NR97 1041 aaKnown RBP11.41□□□□□ -0.58
CLIP1-203ENST00000361654 SLC12A8A0AV02 714 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 MYL2P10916 166 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 GPC1P35052 558 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 RGL4Q8IZJ4 473 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 JADE3Q92613 823 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 JMJD4Q9H9V9 463 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 GJB4Q9NTQ9 266 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 APPL1Q9UKG1 709 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 PCDHB5Q9Y5E4 795 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 ZMYM2Q9UBW7 1377 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 CD163L1Q9NR16 1453 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-203ENST00000361654 MPZL3Q6UWV2 235 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 SMIM5Q71RC9 77 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 COL23A1Q86Y22 540 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-203ENST00000361654 DHX40Q8IX18 779 aaKnown RBP11.4□□□□□ -0.58
CLIP1-203ENST00000361654 ZNF555Q8NEP9 628 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 GRAMD1AQ96CP6 724 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 C7orf25Q9BPX7 421 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 BPIFA3Q9BQP9 254 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 GID8Q9NWU2 228 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 VPS26AO75436 327 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 GNRH1P01148 92 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 PTPN3P26045 913 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 MAPK1P28482 360 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 NAMPTP43490 491 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 NCAPHQ15003 741 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 RPAINQ86UA6 219 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 VMP1Q96GC9 406 aa11.4□□□□□ -0.58
CLIP1-203ENST00000361654 CAMKK2Q96RR4 588 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms