RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 SPATA4Q8NEY3 305 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 TRIM43Q96BQ3 446 aaPredicted RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 KATNAL1Q9BW62 490 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ZNF518BQ9C0D4 1074 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 NUCKS1Q9H1E3 243 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 RSAD1Q9HA92 442 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ANKRD33BA6NCL7 494 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SPDYE4A6NLX3 237 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 TLR3O15455 904 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 KCNE1P15382 129 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CSF2RAP15509 400 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CLCN6P51797 869 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 FAM193AP78312 1265 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 LRRC26Q2I0M4 334 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PPP1R15BQ5SWA1 713 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SYPL2Q5VXT5 272 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PLEKHA7Q6IQ23 1121 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 LRRC8DQ7L1W4 858 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 C16orf59Q7L2K0 433 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PIGZQ86VD9 579 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 AUTS2Q8WXX7 1259 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 RIN2Q8WYP3 895 aaPredicted RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 RAPGEF5Q92565 580 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 HES6Q96HZ4 224 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PGLYRP2Q96PD5 576 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ANLNQ9NQW6 1124 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.04□□□□□ -1.92
LTN1-201ENST00000361371 PHF24Q9UPV7 400 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 MYH4Q9Y623 1939 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CTAGE9A4FU28 777 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ZNF623O75123 536 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ZC3H11AO75152 810 aaKnown RBP eCLIP3.04□□□□□ -1.922e-6■□□□□ 8.9
LTN1-201ENST00000361371 MICAL2O94851 1124 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CD4P01730 458 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CYP1A2P05177 515 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SYN1P17600 705 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 HOXD10P28358 340 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 MICALCLQ6ZW33 695 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PEX26Q7Z412 305 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SPNS2Q8IVW8 549 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SLAIN1Q8ND83 568 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ADAM32Q8TC27 787 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SNRNP27Q8WVK2 155 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 C1orf54Q8WWF1 131 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 UBXN4Q92575 508 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SMOQ99835 787 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 TBC1D13Q9NVG8 400 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 AMACRQ9UHK6 382 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 KCNG1Q9UIX4 513 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 POLR2AP24928 1970 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 PODXLO00592 558 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 CYB561D2O14569 222 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 SCAMP3O14828 347 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 RTN2O75298 545 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 FGGP02679 453 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 FAM153BP0C7A2 387 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 ZSCAN5DPP0CG00 497 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 RARAP10276 462 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 COL6A1P12109 1028 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 GZMAP12544 262 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 CARSP49589 748 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 YARSP54577 528 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 ARPP19P56211 112 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 RPS6KA1Q15418 735 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 TRIP13Q15645 432 aaPredicted RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 FAM153CQ494X1 144 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 FAM109BQ6ICB4 259 aaPredicted RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 MFSD7Q6UXD7 560 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 XYLT1Q86Y38 959 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 NME8Q8N427 588 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 PRELID2Q8N945 189 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 SCAMP5Q8TAC9 235 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 DDX27Q96GQ7 796 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 CFAP57Q96MR6 1250 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 MCEEQ96PE7 176 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 KRT12Q99456 494 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 FAM153AQ9UHL3 310 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 XPO7Q9UIA9 1087 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 JRKLQ9Y4A0 524 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 UNC80Q8N2C7 3258 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 MYH7BA7E2Y1 1941 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 SYNJ2BP-COX16A0A087WUM0 186 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 CTAGE15A4D2H0 777 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 CTAGE8P0CG41 777 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 HSPA1AP0DMV8 641 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 HSPA1BP0DMV9 641 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 LRPAP1P30533 357 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 POU5F1Q01860 360 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 IFRD2Q12894 506 aaPredicted RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 PAK2Q13177 524 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 SIX1Q15475 284 aaPredicted RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 CDO1Q16878 200 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 RTP2Q5QGT7 225 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 OTUD1Q5VV17 481 aaPredicted RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 MRPL10Q7Z7H8 261 aaKnown RBP3.03□□□□□ -1.92
LTN1-201ENST00000361371 CTAGE6Q86UF2 777 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 ERICH1Q86X53 443 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 CTAGE4Q8IX94 777 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 EXOC8Q8IYI6 725 aa3.03□□□□□ -1.92
LTN1-201ENST00000361371 CRIPAKQ8N1N5 446 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms