RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 THEM5Q8N1Q8 247 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 NDE1Q9NXR1 346 aa17.09■□□□□ 0.33
SCAF1-201ENST00000360565 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.09■□□□□ 0.33
SCAF1-201ENST00000360565 PPFIA2O75334 1257 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 TSPY1Q01534 308 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 HSP90AA5PQ58FG0 334 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 GLRA4Q5JXX5 417 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 RABGAP1LQ5R372 815 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 KIAA1841Q6NSI8 718 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 MPZL3Q6UWV2 235 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 KDELC2Q7Z4H8 507 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 SALL4Q9UJQ4 1053 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 ANGPTL3Q9Y5C1 460 aa17.08■□□□□ 0.33
SCAF1-201ENST00000360565 UBOX5O94941 541 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 C1QBPQ07021 282 aaKnown RBP17.08■□□□□ 0.32
SCAF1-201ENST00000360565 IL31RAQ8NI17 732 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 TTYH3Q9C0H2 523 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 E2F8A0AVK6 867 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 TARSP26639 723 aaKnown RBP17.08■□□□□ 0.32
SCAF1-201ENST00000360565 RAP1GAPP47736 663 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 AP2B1P63010 937 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 ANKRD20A4Q4UJ75 823 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 ANKRD20A8PQ5CZ79 823 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 ANKRD20A2Q5SQ80 823 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 ANKRD20A1Q5TYW2 823 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 KRT80Q6KB66 452 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 EIF1ADQ8N9N8 165 aaKnown RBP17.08■□□□□ 0.32
SCAF1-201ENST00000360565 ZNF518BQ9C0D4 1074 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.08■□□□□ 0.32
SCAF1-201ENST00000360565 BCL9LQ86UU0 1499 aa17.08■□□□□ 0.32
SCAF1-201ENST00000360565 ADRB2P07550 413 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 FASTKD1Q53R41 847 aaKnown RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 ARID3BQ8IVW6 561 aaPredicted RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 ARMC2Q8NEN0 867 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 EPAS1Q99814 870 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 GPATCH2LQ9NWQ4 482 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 NOL4O94818 638 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 CPA2P48052 419 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 MORF4L2Q15014 288 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 AMHR2Q16671 573 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 MFSD7Q6UXD7 560 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 SCG3Q8WXD2 468 aaKnown RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 ROBO3Q96MS0 1386 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 KDM4FA0A1W2PPD8 638 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 HNRNPCL1O60812 293 aaKnown RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 PAPOLAP51003 745 aaKnown RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 ITIH4Q14624 930 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 ACOT1Q86TX2 421 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 PURBQ96QR8 312 aaKnown RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 TRIM33Q9UPN9 1127 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 B2RBV5 119 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 CCND1P24385 295 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 SERPINB9P50453 376 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 MARSP56192 900 aaKnown RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
SCAF1-201ENST00000360565 CCDC33Q8N5R6 958 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 PDZD8Q8NEN9 1154 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 PPP1R36Q96LQ0 422 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 DONSONQ9NYP3 566 aa17.07■□□□□ 0.32
SCAF1-201ENST00000360565 TNFRSF8P28908 595 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 DEUP1Q05D60 604 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 BMT2Q1RMZ1 405 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 WDR49Q8IV35 697 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 PRELID2Q8N945 189 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
SCAF1-201ENST00000360565 PGM2Q96G03 612 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 LRFN2Q9ULH4 789 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 GOLGA8CPA6NN73 597 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 DFFAO00273 331 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 CXCL8P10145 99 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 SH3BGRP55822 239 aaPredicted RBP17.06■□□□□ 0.32
SCAF1-201ENST00000360565 CNTN2Q02246 1040 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 KIF19Q2TAC6 998 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 SLC9A9Q8IVB4 645 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 E2F7Q96AV8 911 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 MAGEB18Q96M61 343 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 UPF3AQ9H1J1 476 aaKnown RBP17.06■□□□□ 0.32
SCAF1-201ENST00000360565 PLEKHA5Q9HAU0 1116 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 NPTXRO95502 500 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 CYP2C9P11712 490 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 DSG3P32926 999 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 PTPN11Q06124 597 aaPredicted RBP17.06■□□□□ 0.32
SCAF1-201ENST00000360565 CUL3Q13618 768 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 FBXO16Q8IX29 292 aaPredicted RBP17.06■□□□□ 0.32
SCAF1-201ENST00000360565 MREGQ8N565 214 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 USP33Q8TEY7 942 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 ALG3Q92685 438 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 TSC22D3Q99576 134 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 THTPAQ9BU02 230 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 DPP3Q9NY33 737 aa17.06■□□□□ 0.32
SCAF1-201ENST00000360565 BTNL10A8MVZ5 291 aa17.05■□□□□ 0.32
SCAF1-201ENST00000360565 KIF3CO14782 793 aa17.05■□□□□ 0.32
SCAF1-201ENST00000360565 LSM8O95777 96 aaKnown RBP17.05■□□□□ 0.32
SCAF1-201ENST00000360565 HSD17B4P51659 736 aa17.05■□□□□ 0.32
SCAF1-201ENST00000360565 GTF2BQ00403 316 aa17.05■□□□□ 0.32
SCAF1-201ENST00000360565 NLRP9Q7RTR0 991 aa17.05■□□□□ 0.32
SCAF1-201ENST00000360565 ST13P4Q8IZP2 240 aaPredicted RBP17.05■□□□□ 0.32
SCAF1-201ENST00000360565 SLC16A10Q8TF71 515 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms