RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TTC26A0AVF1 554 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 ZBTB5O15062 677 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 GUCY1B2O75343 617 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 CHI3L2Q15782 390 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 ZSWIM7Q19AV6 140 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 COA7Q96BR5 231 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SLC25A13Q9UJS0 675 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 SMAD5Q99717 465 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 INTS2Q9H0H0 1204 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 EEF2KO00418 725 aaKnown RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 MOCS2O96007 188 aaPredicted RBP9.66□□□□□ -0.86
VPS13A-203ENST00000360280 ZNF302Q9NR11 478 aa9.66□□□□□ -0.86
VPS13A-203ENST00000360280 NQO1P15559 274 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 ADORA2BP29275 332 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 LGALS3BPQ08380 585 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 DBR1Q9UK59 544 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 DGKIO75912 1065 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 EIF2AK2P19525 551 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 R3HDM1Q15032 1099 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 CCDC80Q76M96 950 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 FAM210AQ96ND0 272 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 VCPKMTQ9H867 229 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 FBXO40Q9UH90 709 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 ABCB11O95342 1321 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 TCOF1Q13428 1488 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 UTYO14607 1347 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 C1orf232A0A0U1RR37 186 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 O00370 1275 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 S100A6P06703 90 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 DGUOKQ16854 277 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 MZT2BQ6NZ67 158 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 POLR3FQ9H1D9 316 aaPredicted RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 LIMA1Q9UHB6 759 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 WWP2O00308 870 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 BTN3A3O00478 584 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 PPP2R1BP30154 601 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 MNTQ99583 582 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 MAN1C1Q9NR34 630 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 INTS13Q9NVM9 706 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 THRAP10827 490 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 NOS3P29474 1203 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 CSNK2BP67870 215 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 TRAF3Q13114 568 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 KDELC2Q7Z4H8 507 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 GUF1Q8N442 669 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 ZNF496Q96IT1 587 aaPredicted RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 HOXA13P31271 388 aaPredicted RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 TTLL4Q14679 1199 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 BNC2Q6ZN30 1099 aaPredicted RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 CACTIN-AS1Q8N1I8 211 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 RBBP8NLQ8NC74 664 aaPredicted RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 APBB2Q92870 758 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 RERGLQ9H628 205 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 CCDC182A6NF36 153 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 YWHAZP63104 245 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 TTLL9Q3SXZ7 439 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 DDX53Q86TM3 631 aaKnown RBP9.65□□□□□ -0.86
VPS13A-203ENST00000360280 PPIL6Q8IXY8 311 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 RMDN3Q96TC7 470 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 RPS6KB2Q9UBS0 482 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 FAM47E-STBD1D6RA91 191 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 PADI6Q6TGC4 694 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 CASP12Q6UXS9 341 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 KLHL11Q9NVR0 708 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 FKBP14Q9NWM8 211 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 LMTK3Q96Q04 1460 aa9.65□□□□□ -0.86
VPS13A-203ENST00000360280 HEATR9A2RTY3 570 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 PIK3CDO00329 1044 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 SMAD1Q15797 465 aaKnown RBP9.65□□□□□ -0.87
VPS13A-203ENST00000360280 USP17L2Q6R6M4 530 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 OOSP2Q86WS3 158 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 CPB1P15086 417 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 SCP2P22307 547 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 SERPINB5P36952 375 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 TIMM50Q3ZCQ8 353 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 TAF8Q7Z7C8 310 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 IZUMO1Q8IYV9 350 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 SETD9Q8NE22 299 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 RORBQ92753 470 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 CAMKK2Q96RR4 588 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 NOL6Q9H6R4 1146 aaKnown RBP9.65□□□□□ -0.87
VPS13A-203ENST00000360280 LINC00854A0A1B0GVQ3 168 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 PTCH1Q13635 1447 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 ZCCHC8Q6NZY4 707 aaKnown RBP9.65□□□□□ -0.87
VPS13A-203ENST00000360280 YAF2Q8IY57 180 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 MPP4Q96JB8 637 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 LRRC1Q9BTT6 524 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 ZBTB1Q9Y2K1 713 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 ASMTLO95671 621 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 SLC16A2P36021 539 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 GALNTL6Q49A17 601 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 EPHX4Q8IUS5 362 aa9.65□□□□□ -0.87
VPS13A-203ENST00000360280 CLTBP09497 229 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC130P13994 396 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 SOX11P35716 441 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 MCEEQ96PE7 176 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 SPHKAPQ2M3C7 1700 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 S100A1P23297 94 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms