RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 C11orf63Q6NUN7 778 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 NT5DC3Q86UY8 548 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 ERICH1Q86X53 443 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 HYOU1Q9Y4L1 999 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 MICAL3Q7RTP6 2002 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 CAPN2P17655 700 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 PTPROQ16827 1216 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 GOLGA7BQ2TAP0 167 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 PAN2Q504Q3 1202 aaKnown RBP24.56■■□□□ 1.52
SDF4-202ENST00000360001 DCLRE1AQ6PJP8 1040 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 PEX26Q7Z412 305 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 TMEM86AQ8N2M4 240 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 UBA3Q8TBC4 463 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 CARD6Q9BX69 1037 aa24.56■■□□□ 1.52
SDF4-202ENST00000360001 PFKMP08237 780 aa24.55■■□□□ 1.52
SDF4-202ENST00000360001 MAMLD1Q13495 774 aa24.55■■□□□ 1.52
SDF4-202ENST00000360001 PKDCCQ504Y2 493 aa24.55■■□□□ 1.52
SDF4-202ENST00000360001 COLGALT2Q8IYK4 626 aa24.55■■□□□ 1.52
SDF4-202ENST00000360001 LRRN4CLQ8ND94 238 aa24.55■■□□□ 1.52
SDF4-202ENST00000360001 BTBD6Q96KE9 485 aa24.55■■□□□ 1.52
SDF4-202ENST00000360001 CASD1Q96PB1 797 aa24.55■■□□□ 1.52
SDF4-202ENST00000360001 OSBPL9Q96SU4 736 aa24.55■■□□□ 1.52
SDF4-202ENST00000360001 F8W810 466 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 KIF4AO95239 1232 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 ITGB1P05556 798 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 PAX3P23760 479 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 BRCC3P46736 316 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 WHAMMP3Q1A5X7 153 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 HASPINQ8TF76 798 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 TNIP3Q96KP6 325 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 CPXM1Q96SM3 734 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 PSMB7Q99436 277 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 LRFN2Q9ULH4 789 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 TIMM13Q9Y5L4 95 aaPredicted RBP24.54■■□□□ 1.52
SDF4-202ENST00000360001 TSC2P49815 1807 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 TCRBV5S1A1TA0A578 114 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 I3L4J1 428 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 ZNF185O15231 689 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 TCP1P17987 556 aaKnown RBP24.54■■□□□ 1.52
SDF4-202ENST00000360001 GATMP50440 423 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 MESDQ14696 234 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 TTC30AQ86WT1 665 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 ABI1Q8IZP0 508 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 B3GALNT2Q8NCR0 500 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 TRIM7Q9C029 511 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 DNAI2Q9GZS0 605 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 TJP2Q9UDY2 1190 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 ANAPC7Q9UJX3 599 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 ALG6Q9Y672 507 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 SCINQ9Y6U3 715 aa24.54■■□□□ 1.52
SDF4-202ENST00000360001 M0QZQ0 153 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 ODC1P11926 461 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 ACAT1P24752 427 aaKnown RBP24.53■■□□□ 1.52
SDF4-202ENST00000360001 CXCR5P32302 372 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 RFC2P35250 354 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 GTF2F1P35269 517 aaKnown RBP eCLIP24.53■■□□□ 1.521e-6■■■■□ 22.3
SDF4-202ENST00000360001 RNASELQ05823 741 aaKnown RBP24.53■■□□□ 1.52
SDF4-202ENST00000360001 PDCLQ13371 301 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 RPS6KA1Q15418 735 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 CYP4A22Q5TCH4 519 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 COG1Q8WTW3 980 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 HES6Q96HZ4 224 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 MRPL47Q9HD33 250 aaKnown RBP24.53■■□□□ 1.52
SDF4-202ENST00000360001 PARVAQ9NVD7 372 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 DDX43Q9NXZ2 648 aaKnown RBP24.53■■□□□ 1.52
SDF4-202ENST00000360001 AMFRQ9UKV5 643 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 TRIM43BA6NCK2 446 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 ATP2C2O75185 946 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 CCDC130P13994 396 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 ITGB8P26012 769 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 LHX1P48742 406 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 CNKSR3Q6P9H4 555 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 RSPH1Q8WYR4 309 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 TRIM43Q96BQ3 446 aaPredicted RBP24.53■■□□□ 1.52
SDF4-202ENST00000360001 DNAJB4Q9UDY4 337 aa24.53■■□□□ 1.52
SDF4-202ENST00000360001 TMEM110-MUSTN1A8MSY1 372 aa24.52■■□□□ 1.52
SDF4-202ENST00000360001 CYP11A1P05108 521 aa24.52■■□□□ 1.52
SDF4-202ENST00000360001 DNA2P51530 1060 aa24.52■■□□□ 1.52
SDF4-202ENST00000360001 PSMC1P62191 440 aaKnown RBP24.52■■□□□ 1.52
SDF4-202ENST00000360001 KIAA0319Q5VV43 1072 aa24.52■■□□□ 1.52
SDF4-202ENST00000360001 NPAS4Q8IUM7 802 aa24.52■■□□□ 1.52
SDF4-202ENST00000360001 MCOLN1Q9GZU1 580 aa24.52■■□□□ 1.52
SDF4-202ENST00000360001 STRIP2Q9ULQ0 834 aa24.52■■□□□ 1.52
SDF4-202ENST00000360001 UQCRHLA0A096LP55 91 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 TMEM189-UBE2V1I3L0A0 370 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 GJB6O95452 261 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 TIMP1P01033 207 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 ERBB2P04626 1255 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 UQCRHP07919 91 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 PTPN1P18031 435 aaKnown RBP24.51■■□□□ 1.51
SDF4-202ENST00000360001 GABRB2P47870 512 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 CCDC142Q17RM4 750 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 CREG2Q8IUH2 290 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 C18orf8Q96DM3 657 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 CAPZA3Q96KX2 299 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 SUSD3Q96L08 255 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 FAM193BQ96PV7 902 aaPredicted RBP24.51■■□□□ 1.51
SDF4-202ENST00000360001 HESX1Q9UBX0 185 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 KIAA0355O15063 1070 aa24.51■■□□□ 1.51
SDF4-202ENST00000360001 CTIFO43310 598 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms