RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 GTF3C4Q9UKN8 822 aa14.71□□□□□ -0.05
PDLIM5-203ENST00000359265 KIAA1257Q9ULG3 409 aa14.71□□□□□ -0.05
PDLIM5-203ENST00000359265 LRFN2Q9ULH4 789 aa14.71□□□□□ -0.05
PDLIM5-203ENST00000359265 PCDHB7Q9Y5E2 793 aa14.71□□□□□ -0.05
PDLIM5-203ENST00000359265 GRXCR1A8MXD5 290 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 ENPP3O14638 875 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 SPTLC1O15269 473 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 FANCGO15287 622 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 POMCP01189 267 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 FAM163BP0C2L3 166 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 IGFBP4P22692 258 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 PAX3P23760 479 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 LILRA4P59901 499 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 TUBB2AQ13885 445 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 TCEAL1Q15170 157 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 SOWAHAQ2M3V2 549 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 SGO2Q562F6 1265 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 PASD1Q8IV76 773 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 ADGRF2Q8IZF7 708 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 TMEM35BQ8NCS4 154 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 OR6B3Q8NGW1 331 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 TFAP2BQ92481 460 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 HEXIM2Q96MH2 286 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 MRPL45Q9BRJ2 306 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 TUBB2BQ9BVA1 445 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 ZNF518BQ9C0D4 1074 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 SNX25Q9H3E2 840 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 KANSL3Q9P2N6 904 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 JRKLQ9Y4A0 524 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 PCDHGC5Q9Y5F6 944 aa14.7□□□□□ -0.06
PDLIM5-203ENST00000359265 ABHD14A-ACY1A0A1B0GW23 586 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 GRID2IPA4D2P6 1211 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 CASTOR2A6NHX0 329 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 PALMO75781 387 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 CYP1A2P05177 515 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 WARSP23381 471 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 CDH5P33151 784 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 AFF1P51825 1210 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 HADHBP55084 474 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 PPIGQ13427 754 aaKnown RBP eCLIP14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 NOMO2Q5JPE7 1267 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 CLLU1OSQ5K130 101 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 LIN9Q5TKA1 542 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 LIMS2Q7Z4I7 341 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 PHF13Q86YI8 300 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 MCOLN2Q8IZK6 566 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 ABI1Q8IZP0 508 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 SYCE1Q8N0S2 351 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 TPCN2Q8NHX9 752 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 SLC35G2Q8TBE7 412 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 ARHGEF26Q96DR7 871 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 CYFIP2Q96F07 1278 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 VCPIP1Q96JH7 1222 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 ZSWIM1Q9BR11 485 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 LHX5Q9H2C1 402 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 AVENQ9NQS1 362 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 CTTNBP2NLQ9P2B4 639 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 CNOT8Q9UFF9 292 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 L1RE1Q9UN81 338 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 CHD9Q3L8U1 2897 aa14.69□□□□□ -0.06
PDLIM5-203ENST00000359265 ARHGEF37A1IGU5 675 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 A8MXQ7 604 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CYB561D2O14569 222 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 MTA2O94776 668 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 BAIAP3O94812 1187 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CALB1P05937 261 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CFHP08603 1231 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CSF2RAP15509 400 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 SSTR3P32745 418 aaPredicted RBP14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CLCNKBP51801 687 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 ORC1Q13415 861 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CNGA2Q16280 664 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 UPP1Q16831 310 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 DSTYKQ6XUX3 929 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 MON1BQ7L1V2 547 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 NPAS4Q8IUM7 802 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 TMEM86AQ8N2M4 240 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 MSANTD4Q8NCY6 345 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 C1orf131Q8NDD1 294 aaKnown RBP14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 SPATA18Q8TC71 538 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 KBTBD7Q8WVZ9 684 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CPA5Q8WXQ8 436 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 SENP8Q96LD8 212 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 C11orf70Q9BRQ4 267 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 PBX4Q9BYU1 374 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 L2HGDHQ9H9P8 463 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 IL23AQ9NPF7 189 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 UVRAGQ9P2Y5 699 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CACNG4Q9UBN1 327 aa14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDLIM5-203ENST00000359265 CACNA1AO00555 2505 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 FAM170AA1A519 330 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 M0QYV0 167 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 O00370 1275 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 RIOK3O14730 519 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 ATMINO43313 823 aaPredicted RBP14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 MICAL2O94851 1124 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 ATP1A1P05023 1023 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 FGFR1P11362 822 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 GNL1P36915 607 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms