RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 CARD9Q9H257 536 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 AGO3Q9H9G7 860 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 GIT1Q9Y2X7 761 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 MTCH2Q9Y6C9 303 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 CITO14578 2027 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 TRIP12Q14669 1992 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 LINC01553A4QN01 128 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 PGRMC1O00264 195 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 KCNK3O14649 394 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 SPOPO43791 374 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 HUS1O60921 280 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 PARNO95453 639 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 FTCDO95954 541 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 FGFR4P22455 802 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 RPL9P32969 192 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 TAF6P49848 677 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 INCA1Q0VD86 236 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 NFX1Q12986 1120 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 LPIN1Q14693 890 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 BRD3Q15059 726 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ZBTB6Q15916 424 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ERCC6LQ2NKX8 1250 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 XKR4Q5GH76 650 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 FBXO47Q5MNV8 452 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ALKAL1Q6UXT8 129 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 RTN4RL1Q86UN2 441 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 FAM228AQ86W67 206 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ERICH1Q86X53 443 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 TMEM192Q8IY95 271 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ACTRT1Q8TDG2 376 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 IPO4Q8TEX9 1081 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 RSPH1Q8WYR4 309 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ANKRD7Q92527 254 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 TNIP3Q96KP6 325 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 CAPZA3Q96KX2 299 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 RUNDC3BQ96NL0 473 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 GAS2L1Q99501 681 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 RAD9AQ99638 391 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ARID3AQ99856 593 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 NCAPGQ9BPX3 1015 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 FTHL17Q9BXU8 183 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 EIF2AQ9BY44 585 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 SYNCQ9H7C4 482 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 CDHR5Q9HBB8 845 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 HESX1Q9UBX0 185 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 SIX4Q9UIU6 781 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 MTUS1Q9ULD2 1270 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ST3GAL5Q9UNP4 418 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 NOC2LQ9Y3T9 749 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 IPPQ9Y573 584 aa11.4□□□□□ -0.58
TRAPPC4-201ENST00000359005 ANK1P16157 1881 aa11.4□□□□□ -0.59
TRAPPC4-201ENST00000359005 NCOR1O75376 2440 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 SMIM28A0A1B0GU29 152 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 FANCGO15287 622 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 BUB1BO60566 1050 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 ZNF623O75123 536 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 CILPO75339 1184 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 THP07101 528 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 WEE2P0C1S8 567 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 SETSIPP0DME0 302 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 CDH5P33151 784 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 MAN1A1P33908 653 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 NOMO3P69849 1222 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 ELF2Q15723 593 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 CNGA2Q16280 664 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 ODF2Q5BJF6 829 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 SEL1L2Q5TEA6 688 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 NAA35Q5VZE5 725 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 TMCO3Q6UWJ1 677 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 SCARA5Q6ZMJ2 495 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 NT5DC3Q86UY8 548 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 MMGT1Q8N4V1 131 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 APPL2Q8NEU8 664 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 SPATA18Q8TC71 538 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 LINC01599Q8WXQ3 324 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 SEPT8Q92599 483 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 DDX27Q96GQ7 796 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 HES6Q96HZ4 224 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 HEXIM2Q96MH2 286 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 UROC1Q96N76 676 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 PCDHB18PQ96TA0 734 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 C17orf80Q9BSJ5 609 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 ZBED2Q9BTP6 218 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 APOL6Q9BWW8 343 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 SNX25Q9H3E2 840 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 NXF3Q9H4D5 531 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 FAM105AQ9NUU6 356 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 GDAP2Q9NXN4 497 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 IP6K2Q9UHH9 426 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 SALL4Q9UJQ4 1053 aa11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 TTC7AQ9ULT0 858 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-201ENST00000359005 BDP1A6H8Y1 2624 aa11.38□□□□□ -0.59
TRAPPC4-201ENST00000359005 KPNA7A9QM74 516 aa11.38□□□□□ -0.59
TRAPPC4-201ENST00000359005 ENPP3O14638 875 aa11.38□□□□□ -0.59
TRAPPC4-201ENST00000359005 ATP8B1O43520 1251 aa11.38□□□□□ -0.59
TRAPPC4-201ENST00000359005 UPP2O95045 317 aa11.38□□□□□ -0.59
TRAPPC4-201ENST00000359005 POU3F3P20264 500 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-201ENST00000359005 MMP8P22894 467 aa11.38□□□□□ -0.59
TRAPPC4-201ENST00000359005 LRPAP1P30533 357 aa11.38□□□□□ -0.59
TRAPPC4-201ENST00000359005 HTRA4P83105 476 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms