RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SLC9A1P19634 815 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 MTFR1Q15390 333 aa9.13□□□□□ -0.95
COL6A6-201ENST00000358511 EXOSC4Q9NPD3 245 aaKnown RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 BSDC1Q9NW68 430 aaPredicted RBP9.13□□□□□ -0.95
COL6A6-201ENST00000358511 PTK2BQ14289 1009 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 DLGAP5Q15398 846 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 RSBN1Q5VWQ0 802 aaPredicted RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 PTPRN2Q92932 1015 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 FAM213AQ9BRX8 229 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 CLEC4MQ9H2X3 399 aaPredicted RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 IL1RL2Q9HB29 575 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SLC24A2Q9UI40 661 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 CCDC130P13994 396 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 KCNJ1P48048 391 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 OXNAD1Q96HP4 312 aaPredicted RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 FRMD8P1Q9BZ68 369 aaPredicted RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 RNPEPQ9H4A4 650 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 MED26O95402 600 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 RALAP11233 206 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 MMRN1Q13201 1228 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SEL1L3Q68CR1 1132 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 GINS4Q9BRT9 223 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 MYO9BQ13459 2157 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 DENND3A2RUS2 1198 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 EIF3DO15371 548 aaKnown RBP eCLIP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 XPAP23025 273 aaPredicted RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 CDC25CP30307 473 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SCNN1DP51172 638 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 CCDC149Q6ZUS6 474 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 EFL1Q7Z2Z2 1120 aaKnown RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 METTL23Q86XA0 190 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 C19orf18Q8NEA5 215 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 DHX35Q9H5Z1 703 aaKnown RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SYNDIG1Q9H7V2 258 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 GDF3Q9NR23 364 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 PRKAG2Q9UGJ0 569 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 DLC1Q96QB1 1528 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 P4HA2O15460 535 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 UNC5CO95185 931 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 RAG1P15918 1043 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 NFKBIAP25963 317 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SKIV2L2P42285 1042 aaKnown RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SESN2P58004 480 aaPredicted RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 OSTNP61366 133 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SEPT1Q8WYJ6 367 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SHCBP1LQ9BZQ2 653 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 RSAD1Q9HA92 442 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 EURLQ9NYK6 297 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 TMCO1Q9UM00 188 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SUGT1Q9Y2Z0 365 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 ZNF862O60290 1169 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 KCNA6P17658 529 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 CDH3P22223 829 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 AP3M2P53677 418 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 TRIP4Q15650 581 aaPredicted RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 MROH9Q5TGP6 573 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 PSMG1O95456 288 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 MTMR1Q13613 665 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SKIV2LQ15477 1246 aaKnown RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 CDKAL1Q5VV42 579 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 ZNF677Q86XU0 584 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 CD302Q8IX05 232 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 GPD1LQ8N335 351 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 TATDN2Q93075 761 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 NOL6Q9H6R4 1146 aaKnown RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 METTL5Q9NRN9 209 aaKnown RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 KLHL20Q9Y2M5 609 aa9.12□□□□□ -0.95
COL6A6-201ENST00000358511 HBS1LQ9Y450 684 aaKnown RBP9.12□□□□□ -0.95
COL6A6-201ENST00000358511 CNTFP26441 200 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 MXD4Q14582 209 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 MTERF2Q49AM1 385 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TFDP3Q5H9I0 405 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 CPA5Q8WXQ8 436 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 PGM2Q96G03 612 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 EGFL8Q99944 293 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 C6orf62Q9GZU0 229 aaPredicted RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 PCDHGB4Q9UN71 923 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 PCDHA6Q9UN73 950 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 PCDHA8Q9Y5H6 950 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 NMT2O60551 498 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 SARSP49591 514 aaKnown RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 WASHC5Q12768 1159 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TTMPQ5BVD1 217 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 C1orf131Q8NDD1 294 aaKnown RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 FBXO25Q8TCJ0 367 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 EIF2AK1Q9BQI3 630 aaKnown RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 CCDC28BQ9BUN5 200 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TUFT1Q9NNX1 390 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TMEM161AQ9NX61 479 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 MBD2Q9UBB5 411 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 TBX22Q9Y458 520 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 HEG1Q9ULI3 1381 aa9.11□□□□□ -0.95
COL6A6-201ENST00000358511 SMAD1Q15797 465 aaKnown RBP9.11□□□□□ -0.95
COL6A6-201ENST00000358511 AARS2Q5JTZ9 985 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms