RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■■□□ 17.6
IFT20-202ENST00000357896 NMT1P30419 496 aaKnown RBP17.15■□□□□ 0.34
IFT20-202ENST00000357896 DHPSP49366 369 aaPredicted RBP17.15■□□□□ 0.34
IFT20-202ENST00000357896 NR1H3Q13133 447 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 TTC38Q5R3I4 469 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 KRT79Q5XKE5 535 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 TXNDC8Q6A555 127 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 KIAA1211LQ6NV74 962 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 CD302Q8IX05 232 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 IGSF22Q8N9C0 903 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 OSCP1Q8WVF1 389 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 PIGKQ92643 395 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 BICD1Q96G01 975 aa17.15■□□□□ 0.34
IFT20-202ENST00000357896 CNOT6LQ96LI5 555 aaKnown RBP17.15■□□□□ 0.34
IFT20-202ENST00000357896 NUSAP1Q9BXS6 441 aaKnown RBP17.15■□□□□ 0.34
IFT20-202ENST00000357896 FOXP1Q9H334 677 aaPredicted RBP17.15■□□□□ 0.34
IFT20-202ENST00000357896 RPF1Q9H9Y2 349 aaKnown RBP17.15■□□□□ 0.34
IFT20-202ENST00000357896 DUS2Q9NX74 493 aaKnown RBP17.15■□□□□ 0.34
IFT20-202ENST00000357896 H0Y626 953 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 JAK2O60674 1132 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 TRIM16O95361 564 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 ADRB2P07550 413 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 HMGA1P17096 107 aaKnown RBP17.14■□□□□ 0.33
IFT20-202ENST00000357896 TRAPPC10P48553 1259 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 MTF1Q14872 753 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 RASSF3Q86WH2 238 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 EZH1Q92800 747 aaPredicted RBP17.14■□□□□ 0.33
IFT20-202ENST00000357896 TPSD1Q9BZJ3 242 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 ATG2BQ96BY7 2078 aa17.14■□□□□ 0.33
IFT20-202ENST00000357896 TAF4O00268 1085 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 PIRO00625 290 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 PPEF2O14830 753 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 CSH1P0DML2 217 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 CSH2P0DML3 217 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 TNFSF9P41273 254 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 DPP6P42658 865 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 IFNAR2P48551 515 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
IFT20-202ENST00000357896 TRIM61Q5EBN2 209 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 C9orf57Q5W0N0 161 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 NAIF1Q69YI7 327 aaPredicted RBP17.13■□□□□ 0.33
IFT20-202ENST00000357896 ANO7Q6IWH7 933 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 LPCAT2Q7L5N7 544 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 DCP1BQ8IZD4 617 aaKnown RBP17.13■□□□□ 0.33
IFT20-202ENST00000357896 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 HAPLN2Q9GZV7 340 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 ABI2Q9NYB9 513 aaPredicted RBP17.13■□□□□ 0.33
IFT20-202ENST00000357896 UXTQ9UBK9 157 aaPredicted RBP17.13■□□□□ 0.33
IFT20-202ENST00000357896 KLK13Q9UKR3 277 aa17.13■□□□□ 0.33
IFT20-202ENST00000357896 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
IFT20-202ENST00000357896 ITPR1Q14643 2758 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 UPK3BL1B0FP48 263 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 UPK3BL2E5RIL1 263 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 CYB561D2O14569 222 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 TNFRSF10BO14763 440 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 OGTO15294 1046 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 MAP3K13O43283 966 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 ALDH1A2O94788 518 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 BCKDHBP21953 392 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 SCP2P22307 547 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 LIG4P49917 911 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 ANAPC15P60006 121 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 SIM1P81133 766 aaPredicted RBP17.12■□□□□ 0.33
IFT20-202ENST00000357896 GUCY1B3Q02153 619 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 SPDYCQ5MJ68 293 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 LMBRD2Q68DH5 695 aaPredicted RBP17.12■□□□□ 0.33
IFT20-202ENST00000357896 LRRTM3Q86VH5 581 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 SYT12Q8IV01 421 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 RIN3Q8TB24 985 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 USP33Q8TEY7 942 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 FAM212AQ96EL1 285 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 KCND2Q9NZV8 630 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 LARSQ9P2J5 1176 aaKnown RBP17.12■□□□□ 0.33
IFT20-202ENST00000357896 MAGED2Q9UNF1 606 aaPredicted RBP17.12■□□□□ 0.33
IFT20-202ENST00000357896 DERAQ9Y315 318 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 PCDHB5Q9Y5E4 795 aa17.12■□□□□ 0.33
IFT20-202ENST00000357896 NUP205Q92621 2012 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 ANO9A1A5B4 782 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 FAM221BA6H8Z2 402 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 HNRNPDLO14979 420 aaKnown RBP17.11■□□□□ 0.33
IFT20-202ENST00000357896 USP17L7P0C7H9 530 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 MAPK8P45983 427 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 CDR1P51861 262 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 RAD51AP2Q09MP3 1159 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 GNL2Q13823 731 aaKnown RBP17.11■□□□□ 0.33
IFT20-202ENST00000357896 NFE2Q16621 373 aaPredicted RBP17.11■□□□□ 0.33
IFT20-202ENST00000357896 EML3Q32P44 896 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 C2orf27AQ580R0 203 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 JADE1Q6IE81 842 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 KCTD17Q8N5Z5 321 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 C8orf76Q96K31 380 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 SPACA7Q96KW9 195 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 TMEM206Q9H813 350 aa17.11■□□□□ 0.33
IFT20-202ENST00000357896 FREM2Q5SZK8 3169 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 FAM189A1O60320 539 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 CKMP06732 381 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 ENGP17813 658 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms