RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 A0A087X0T9 212 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 H0Y626 953 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 AP5Z1O43299 807 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 TRIM16O95361 564 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 F9P00740 461 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 FAM228BP0C875 321 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 CNTFP26441 200 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 RGS7P49802 495 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 ERVK-24P63145 666 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 PLA2G4FQ68DD2 849 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 LRRC6Q86X45 466 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 STKLD1Q8NE28 680 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 TNIP2Q8NFZ5 429 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 CCDC126Q96EE4 140 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 NSL1Q96IY1 281 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 UNC45AQ9H3U1 944 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 TASP1Q9H6P5 420 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 CASS4Q9NQ75 786 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 DDX4Q9NQI0 724 aaKnown RBP12.25□□□□□ -0.45
COL9A1-202ENST00000357250 GGA3Q9NZ52 723 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 ALDH1A1P00352 501 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 VDRP11473 427 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 RPS6P62753 249 aaKnown RBP12.25□□□□□ -0.45
COL9A1-202ENST00000357250 KCNA1Q09470 495 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 RRM2BQ7LG56 351 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 ZFPM1Q8IX07 1006 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 USP13Q92995 863 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-202ENST00000357250 RIOX1Q9H6W3 641 aa12.25□□□□□ -0.45
COL9A1-202ENST00000357250 CFAP99D6REC4 459 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 MAN1A2O60476 641 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 SRP72O76094 671 aaKnown RBP12.24□□□□□ -0.45
COL9A1-202ENST00000357250 MRPS35P82673 323 aaKnown RBP12.24□□□□□ -0.45
COL9A1-202ENST00000357250 GLB1LQ6UWU2 654 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 TARS2Q9BW92 718 aaKnown RBP12.24□□□□□ -0.45
COL9A1-202ENST00000357250 YIPF3Q9GZM5 350 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 COG4Q9H9E3 785 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 PCMTD2Q9NV79 361 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 KLHL11Q9NVR0 708 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 TMEM51Q9NW97 253 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL9A1-202ENST00000357250 TFR2Q9UP52 801 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 GOLGA8RI6L899 631 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 O00370 1275 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 PTGER2P43116 358 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 KRT72Q14CN4 511 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 PKN1Q16512 942 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 DGKDQ16760 1214 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 EFCAB12Q6NXP0 572 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 LVRNQ6Q4G3 990 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 ANKS3Q6ZW76 656 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 ZKSCAN4Q969J2 545 aaPredicted RBP12.24□□□□□ -0.45
COL9A1-202ENST00000357250 DEFB129Q9H1M3 183 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 ELP3Q9H9T3 547 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 GLRA3O75311 464 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
COL9A1-202ENST00000357250 CORO7P57737 925 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 C11orf63Q6NUN7 778 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 ILDR1Q86SU0 546 aaPredicted RBP12.24□□□□□ -0.45
COL9A1-202ENST00000357250 TMCO5AQ8N6Q1 288 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 ZNF555Q8NEP9 628 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 SH3KBP1Q96B97 665 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 ARL8AQ96BM9 186 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 FUT8Q9BYC5 575 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 CCDC90BQ9GZT6 254 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 CYP3A43Q9HB55 503 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 L1RE1Q9UN81 338 aa12.24□□□□□ -0.45
COL9A1-202ENST00000357250 RPS6KA5O75582 802 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 APOA1P02647 267 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 FAM200BP0CF97 657 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 CYP2C9P11712 490 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 MAP4P27816 1152 aaKnown RBP12.23□□□□□ -0.45
COL9A1-202ENST00000357250 FLOT2Q14254 428 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 C20orf96Q9NUD7 363 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-202ENST00000357250 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-202ENST00000357250 ZC3H4Q9UPT8 1303 aaKnown RBP12.23□□□□□ -0.45
COL9A1-202ENST00000357250 ZNF263O14978 683 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 TADA2AO75478 443 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 RARBP10826 455 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 GNL1P36915 607 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-202ENST00000357250 KLK7P49862 253 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 STX5Q13190 355 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 C4orf19Q8IY42 314 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 ANKRD13AQ8IZ07 590 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 GPRC5AQ8NFJ5 357 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 EXD1Q8NHP7 514 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 CAVIN3Q969G5 261 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 ELMO2Q96JJ3 720 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 THAP2Q9H0W7 228 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 MYOZ2Q9NPC6 264 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL9A1-202ENST00000357250 SLC24A2Q9UI40 661 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 DYNC1LI2O43237 492 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-202ENST00000357250 RALBP11234 206 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 CETPP11597 493 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 KCNA4P22459 653 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 GIT2Q14161 759 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 FAM83EQ2M2I3 478 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 NT5DC1Q5TFE4 455 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 SHCBP1Q8NEM2 672 aa12.23□□□□□ -0.45
COL9A1-202ENST00000357250 TFB1MQ8WVM0 346 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms