RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TRPC3Q13507 836 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 RAB33AQ14088 237 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 STX1AQ16623 288 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ZACNQ401N2 412 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CCDC40Q4G0X9 1142 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 C1orf220Q5T0J3 134 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 TDRD10Q5VZ19 366 aaKnown RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 SLC8B1Q6J4K2 584 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 PRSS55Q6UWB4 352 aaPredicted RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CYP26C1Q6V0L0 522 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 C15orf39Q6ZRI6 1047 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 RTL10Q7L3V2 364 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 FRMD5Q7Z6J6 570 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 FILIP1Q7Z7B0 1213 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CEP57Q86XR8 500 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CSGALNACT2Q8N6G5 542 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 KDF1Q8NAX2 398 aaPredicted RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ATXN2LQ8WWM7 1075 aaKnown RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 PPM1EQ8WY54 764 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 TAF4BQ92750 862 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CCDC127Q96BQ5 260 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 BORCS6Q96GS4 357 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 MSLNLQ96KJ4 702 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 B3GALT6Q96L58 329 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 IGFLR1Q9H665 355 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 TMEM8AQ9HCN3 771 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 FAM50BQ9Y247 325 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 HCFC2Q9Y5Z7 792 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 PTPRDP23468 1912 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 KPNA7A9QM74 516 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CYB561D2O14569 222 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 HUS1O60921 280 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 PHACTR2O75167 634 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 OAZ2O95190 189 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 HLA-DRAP01903 254 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 C4BPAP04003 597 aaKnown RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 KRT19P08727 400 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 TRIM49P0CI25 452 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 TRIM49CP0CI26 452 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 EPCAMP16422 314 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 WARSP23381 471 aaKnown RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 IGFBP6P24592 240 aaPredicted RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ERCC5P28715 1186 aaPredicted RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 HOXA9P31269 272 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CTSOP43234 321 aaPredicted RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 MXI1P50539 228 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 TNNC1P63316 161 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 MRPS5P82675 430 aaKnown RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ROR1Q01973 937 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 KLHL40Q2TBA0 621 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ZNF699Q32M78 642 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CTXN3Q4LDR2 81 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 TPGS2Q68CL5 300 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ISM2Q6H9L7 571 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 OVOS1Q6IE37 1185 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 LLGL2Q6P1M3 1020 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 DPH6Q7L8W6 267 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 LIMS2Q7Z4I7 341 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 RBM23Q86U06 439 aaKnown RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ADGRF2Q8IZF7 708 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 HPDLQ96IR7 371 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 FAM84AQ96KN4 292 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 INSM2Q96T92 566 aaPredicted RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CLSTN3Q9BQT9 956 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 PLEKHA4Q9H4M7 779 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 MAN1C1Q9NR34 630 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ANO10Q9NW15 660 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ZDHHC7Q9NXF8 308 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 CLEC1BQ9P126 229 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 ARMCX3Q9UH62 379 aaPredicted RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 FBXL5Q9UKA1 691 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 BARX2Q9UMQ3 279 aaPredicted RBP4.26□□□□□ -1.73
CNOT4-202ENST00000356162 L1RE1Q9UN81 338 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 C2orf16Q68DN1 1984 aa4.26□□□□□ -1.73
CNOT4-202ENST00000356162 PATJQ8NI35 1801 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 FIGNL2A6NMB9 653 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PER2O15055 1255 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PMM2O15305 246 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 TGM5O43548 720 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 VNN1O95497 513 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 HNRNPA1P09651 372 aaKnown RBP eCLIP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 CCDC192P0DO97 292 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 P4HA1P13674 534 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 RPL17P18621 184 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 KCNA5P22460 613 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PCSK1P29120 753 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 LTBRP36941 435 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 MTHFRP42898 656 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 STX17P56962 302 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 MYL6P60660 151 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 MYL7Q01449 175 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 ITIH3Q06033 890 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SMARCB1Q12824 385 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 NCOA4Q13772 614 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 DPCR1Q3MIW9 517 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 DCAF17Q5H9S7 520 aaPredicted RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 ZNF667Q5HYK9 610 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 LIN9Q5TKA1 542 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 WSCD1Q658N2 575 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 KRT39Q6A163 491 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms