RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CDC27P30260 824 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 GLRA4Q5JXX5 417 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 BRINP3Q76B58 766 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 KIF2CQ99661 725 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 CNOT7Q9UIV1 285 aaKnown RBP17.93■□□□□ 0.46
COL27A1-201ENST00000356083 VWA5AO00534 786 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 MBL2P11226 248 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-201ENST00000356083 MARSP56192 900 aaKnown RBP17.93■□□□□ 0.46
COL27A1-201ENST00000356083 STX3Q13277 289 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 CAMK1Q14012 370 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 DSG4Q86SJ6 1040 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 NSUN7Q8NE18 718 aaKnown RBP17.93■□□□□ 0.46
COL27A1-201ENST00000356083 STAMBPL1Q96FJ0 436 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 TMCC3Q9ULS5 477 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 RBM7Q9Y580 266 aaKnown RBP17.93■□□□□ 0.46
COL27A1-201ENST00000356083 CELF2O95319 508 aaKnown RBP17.93■□□□□ 0.46
COL27A1-201ENST00000356083 TAP1Q03518 808 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 MIB1Q86YT6 1006 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 ABHD10Q9NUJ1 306 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 SMNDC1O75940 238 aaKnown RBP eCLIP17.93■□□□□ 0.469e-7■□□□□ 10.4
COL27A1-201ENST00000356083 PRDX5P30044 214 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 MTSS1LQ765P7 747 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 PRPF39Q86UA1 669 aaKnown RBP17.93■□□□□ 0.46
COL27A1-201ENST00000356083 SCFD2Q8WU76 684 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 OSBP2Q969R2 916 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 SGF29Q96ES7 293 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 C2orf81A6NN90 581 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 NCOA4Q13772 614 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 UGT3A1Q6NUS8 523 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 AMACRQ9UHK6 382 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 CCNIQ14094 377 aa17.93■□□□□ 0.46
COL27A1-201ENST00000356083 SMIM31A0A1B0GVY4 71 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 FAM25AB3EWG3 89 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 FAM25CB3EWG5 89 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 FAM25GB3EWG6 89 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 B3GAT3O94766 335 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 CKBP12277 381 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 ATP1A3P13637 1013 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 AKAP7Q9P0M2 348 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-201ENST00000356083 ZNF24P17028 368 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 KLC1Q07866 573 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 GPRASP2Q96D09 838 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 OXCT2Q9BYC2 517 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-201ENST00000356083 RBP5P82980 135 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 R3HDM1Q15032 1099 aaKnown RBP17.92■□□□□ 0.46
COL27A1-201ENST00000356083 SUSD4Q5VX71 490 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 HLA-DQA1Q5Y7H0 255 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 CARD9Q9H257 536 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 SNAPC2Q13487 334 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 ZNF618Q5T7W0 954 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 TPD52L3Q96J77 140 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 RAD21L1Q9H4I0 556 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 PCDHGA3Q9Y5H0 932 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 ZNF682O95780 498 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 CYP2E1P05181 493 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-201ENST00000356083 CLTBP09497 229 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 CDC25BP30305 580 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 CLK2P49760 499 aaKnown RBP17.92■□□□□ 0.46
COL27A1-201ENST00000356083 INTS2Q9H0H0 1204 aaKnown RBP17.92■□□□□ 0.46
COL27A1-201ENST00000356083 AVENQ9NQS1 362 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-201ENST00000356083 GOLGA7BQ2TAP0 167 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 CENPLQ8N0S6 344 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-201ENST00000356083 ENGASEQ8NFI3 743 aa17.92■□□□□ 0.46
COL27A1-201ENST00000356083 A8MX80 341 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 hCG_1984214I3L0E3 225 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 AP3D1O14617 1153 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 KRT16P08779 473 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 TMED10P49755 219 aaKnown RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 SFSWAPQ12872 951 aaKnown RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 PMM1Q92871 262 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 OLFM3Q96PB7 478 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 RHOBTB2Q9BYZ6 727 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 SH3BP4Q9P0V3 963 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 SCGNO76038 276 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 USP1O94782 785 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 MYL4P12829 197 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 AASDHQ4L235 1098 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 MROH9Q5TGP6 573 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 PANX2Q96RD6 677 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 SH3BGRLO75368 114 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 TXNRD1Q16881 649 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 RAD54LQ92698 747 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 XPO6Q96QU8 1125 aaKnown RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 MIF4GDA9UHW6 222 aaKnown RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 IFRD1O00458 451 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 SRP72O76094 671 aaKnown RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 GRK4P32298 578 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 FNTAP49354 379 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 ZNF200P98182 395 aaPredicted RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 TAF5Q15542 800 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 LRRC74BQ6ZQY2 392 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 TRMT11Q7Z4G4 463 aaKnown RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 MRPL42Q9Y6G3 142 aaKnown RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 TIPRLO75663 272 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 GGPS1O95749 300 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 HUNKP57058 714 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 PDIA6Q15084 440 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 LONRF1Q17RB8 773 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 TTLL9Q3SXZ7 439 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 TMEM117Q9H0C3 514 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms