RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 CA12O43570 354 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 LMNAP02545 664 aaKnown RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 HIRAP54198 1017 aaPredicted RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 SF3A3Q12874 501 aaKnown RBP eCLIP11.76□□□□□ -0.532e-10■■■■□ 26.7
FN1-204ENST00000356005 SGCGQ13326 291 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 NECAB2Q7Z6G3 386 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 CATSPER3Q86XQ3 398 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 CCNYL1Q8N7R7 359 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 GOLPH3Q9H4A6 298 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 CYP4F11Q9HBI6 524 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 KIF13AQ9H1H9 1805 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 NPHP3-ACAD11A0A0J9YXS1 232 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 PPM1AP35813 382 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 GRIN1Q05586 938 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 MYMKA6NI61 221 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 POLR2LP62875 67 aaKnown RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 ZKSCAN8Q15776 578 aaPredicted RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 KCTD16Q68DU8 428 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 SNX31Q8N9S9 440 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 NR1H4Q96RI1 486 aaPredicted RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 PPARDQ03181 441 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 KRT80Q6KB66 452 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 PITPNM3Q9BZ71 974 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 DCLK3Q9C098 648 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 ZCCHC2Q9C0B9 1178 aaKnown RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 FAM32AQ9Y421 112 aaKnown RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 UMODL1Q5DID0 1318 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 KCNA2P16389 499 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 PDIA2Q13087 525 aaKnown RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 ZRANB3Q5FWF4 1079 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 GPAT2Q6NUI2 795 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 PRUNE1Q86TP1 453 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 OR9Q1Q8NGQ5 310 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 OSBPL9Q96SU4 736 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 DDIT4Q9NX09 232 aa11.76□□□□□ -0.53
FN1-204ENST00000356005 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
FN1-204ENST00000356005 A0A087WWV3 80 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 LARGE1O95461 756 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 MFSD4BQ5TF39 518 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 LMBRD2Q68DH5 695 aaPredicted RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 NUDCD3Q8IVD9 361 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 PRPF18Q99633 342 aaKnown RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 PCDHB5Q9Y5E4 795 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 FRMD3A2A2Y4 597 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 MYL4P12829 197 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 FDFT1P37268 417 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 PCSK7Q16549 785 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 AGAP3Q96P47 875 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 NLNQ9BYT8 704 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 MRPL17Q9NRX2 175 aaKnown RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 SCAF8Q9UPN6 1271 aaKnown RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 HEATR9A2RTY3 570 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 IFRD1O00458 451 aaPredicted RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 MAPTP10636 758 aaKnown RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 SLCO1A2P46721 670 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 CCDC157Q569K6 752 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 AHCYL2Q96HN2 611 aaKnown RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 RTFDC1Q9BY42 306 aaPredicted RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 RAB6BQ9NRW1 208 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 NDUFS2O75306 463 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 RPN2P04844 631 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 VDRP11473 427 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 SESN3P58005 492 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 CUL2Q13617 745 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 RPRD1AQ96P16 312 aaPredicted RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 GJB4Q9NTQ9 266 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 C6orf203Q9P0P8 240 aaPredicted RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 VWA5AO00534 786 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 ZNF263O14978 683 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 NCAM2O15394 837 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 LAMTOR4Q0VGL1 99 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 CPA5Q8WXQ8 436 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 PP2D1A8MPX8 630 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 DIAPH2O60879 1101 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 SLC18A3Q16572 532 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 FAM9CQ8IZT9 166 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 RUBCNLQ9H714 662 aa11.75□□□□□ -0.53
FN1-204ENST00000356005 KRCC1Q9NPI7 259 aaPredicted RBP11.75□□□□□ -0.53
FN1-204ENST00000356005 CLASP2O75122 1294 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 VIL1P09327 827 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 CAMK2GQ13555 558 aaPredicted RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.539e-7■■□□□ 12.5
FN1-204ENST00000356005 TAGAPQ8N103 731 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 USP38Q8NB14 1042 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 TMEM60Q9H2L4 133 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 CD274Q9NZQ7 290 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 DBR1Q9UK59 544 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 WEE2P0C1S8 567 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 CLEC10AQ8IUN9 316 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 UROC1Q96N76 676 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 SLC13A1Q9BZW2 595 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 ZNF518BQ9C0D4 1074 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms