RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TMEM40Q8WWA1 233 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 ASB11Q8WXH4 323 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 MRFAP1L1Q96HT8 127 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 CDK5RAP3Q96JB5 506 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 CDHR1Q96JP9 859 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 GPR20Q99678 358 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 C7orf25Q9BPX7 421 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 RTP3Q9BQQ7 232 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 POLR3CQ9BUI4 534 aaPredicted RBP7.64□□□□□ -1.19
VPS13A-201ENST00000355766 BCAS3Q9H6U6 928 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 TTC12Q9H892 705 aaPredicted RBP7.64□□□□□ -1.19
VPS13A-201ENST00000355766 AGO3Q9H9G7 860 aaKnown RBP7.64□□□□□ -1.19
VPS13A-201ENST00000355766 KCND2Q9NZV8 630 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 PCDHB12Q9Y5F1 795 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 CDY2AQ9Y6F7 541 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 PLXNA4Q9HCM2 1894 aa7.64□□□□□ -1.19
VPS13A-201ENST00000355766 LOXHD1Q8IVV2 1947 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 A0A087X0B3 334 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 MBLAC1A4D2B0 266 aaPredicted RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 GOLGA6L6A8MZA4 724 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 FAM86B1E9PN63 330 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 GIPC1O14908 333 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 PI15O43692 258 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 RHOBTB3O94955 611 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 CELA3AP09093 270 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 FAM86B2P0C5J1 330 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 ARP10275 920 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 PLCG1P19174 1290 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 RPA1P27694 616 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 MRPS6P82932 125 aaKnown RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 ITIH3Q06033 890 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 PPFIA1Q13136 1202 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 IKZF1Q13422 519 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 PNOCQ13519 176 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 INPP5AQ14642 412 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 KARSQ15046 597 aaKnown RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 ZNF124Q15973 351 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 GNPTABQ3T906 1256 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 SPOUT1Q5T280 376 aaKnown RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 UTP14CQ5TAP6 766 aaKnown RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 ALG1LQ6GMV1 187 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 CES5AQ6NT32 575 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 USP49Q70CQ1 688 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 RTN4RL1Q86UN2 441 aaPredicted RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 THNSL1Q8IYQ7 743 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 COLGALT1Q8NBJ5 622 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 ENOX1Q8TC92 643 aaKnown RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 LARP4BQ92615 738 aaKnown RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 CASP10Q92851 521 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 SLC5A5Q92911 643 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 GPRASP2Q96D09 838 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 ASB16Q96NS5 453 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 INPP4AQ96PE3 977 aaPredicted RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 TCF25Q9BQ70 676 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 MMTAG2Q9BU76 263 aaKnown RBP7.63□□□□□ -1.19
VPS13A-201ENST00000355766 TRIM9Q9C026 710 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 ADAM7Q9H2U9 754 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 TUFT1Q9NNX1 390 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 CYP8B1Q9UNU6 501 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 LZTS1Q9Y250 596 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 SQORQ9Y6N5 450 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 R4GN57 208 aa7.63□□□□□ -1.19
VPS13A-201ENST00000355766 ACACBO00763 2458 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 IGSF9BQ9UPX0 1349 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 HIDE1A8MVS5 230 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 MSH4O15457 936 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 MARCH6O60337 910 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 RPLP2P05387 115 aaKnown RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 LAG3P18627 525 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 HOXA13P31271 388 aaPredicted RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 ZNF76P36508 570 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 MTHFRP42898 656 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 SPAG1Q07617 926 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 PAK2Q13177 524 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 PSMD2Q13200 908 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 STIM1Q13586 685 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 NEDD9Q14511 834 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 ST3GAL2Q16842 350 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 PRR16Q569H4 304 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 SPECC1Q5M775 1068 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 ZNF658Q5TYW1 1059 aaPredicted RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 SCARA3Q6AZY7 606 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 KIAA1841Q6NSI8 718 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 ZC3H14Q6PJT7 736 aaKnown RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 B3GNT9Q6UX72 402 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 C11orf57Q6ZUT1 292 aaPredicted RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 SV2BQ7L1I2 683 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 ARMCX6Q7L4S7 300 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 CYFIP1Q7L576 1253 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 DHX40Q8IX18 779 aaKnown RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 PDILTQ8N807 584 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 GIMAP8Q8ND71 665 aaPredicted RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 NOC3LQ8WTT2 800 aaKnown RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 DNAJB3Q8WWF6 145 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 RUBCNQ92622 972 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 RAD54LQ92698 747 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 TRIM44Q96DX7 344 aaPredicted RBP7.62□□□□□ -1.19
VPS13A-201ENST00000355766 MXRA8Q9BRK3 442 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 PANK2Q9BZ23 570 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 ENTPD7Q9NQZ7 604 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms