RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 KRT87PA6NCN2 255 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 SMAPO00193 183 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 KRT16P08779 473 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 LRIG3Q6UXM1 1119 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 CLEC4FQ8N1N0 589 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 PHF21AQ96BD5 680 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 CHD1O14646 1710 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 A0A1W2PQJ5 194 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 KLRK1P26718 216 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 BTN2A2Q8WVV5 523 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 SEPT8Q92599 483 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 FAM162AQ96A26 154 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 FOXP3Q9BZS1 431 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 HPS4Q9NQG7 708 aa18.78■□□□□ 0.6
COL18A1-202ENST00000355480 DCDC2CA8MYV0 355 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 C4orf22Q6V702 233 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 ACER1Q8TDN7 264 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 PLEKHA8Q96JA3 519 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 RUSC1Q9BVN2 902 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 ANXA9O76027 345 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 MUTP22033 750 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 ZNF484Q5JVG2 852 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 SH2D3CQ8N5H7 860 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 CLCN3P51790 818 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 ORC1Q13415 861 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 LINC00523Q86TU6 105 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 SGSM3Q96HU1 749 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 C17orf80Q9BSJ5 609 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 RIC8BQ9NVN3 520 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 TUBE1Q9UJT0 475 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.6
COL18A1-202ENST00000355480 SLC37A4O43826 429 aa18.77■□□□□ 0.59
COL18A1-202ENST00000355480 PGK2P07205 417 aa18.77■□□□□ 0.59
COL18A1-202ENST00000355480 KCNJ1P48048 391 aa18.77■□□□□ 0.59
COL18A1-202ENST00000355480 POLD3Q15054 466 aaPredicted RBP18.77■□□□□ 0.59
COL18A1-202ENST00000355480 BOLA3Q53S33 107 aa18.77■□□□□ 0.59
COL18A1-202ENST00000355480 OGTO15294 1046 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 RAD51CO43502 376 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 PPP1R37O75864 691 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 RAP1GDS1P52306 607 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 CNGA3Q16281 694 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 KYNUQ16719 465 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 HIST2H2ACQ16777 129 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-202ENST00000355480 HIST2H2AA3Q6FI13 130 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 MIB1Q86YT6 1006 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 PRMT6Q96LA8 375 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-202ENST00000355480 ENTPD7Q9NQZ7 604 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 GRID1Q9ULK0 1009 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 ASS1P00966 412 aaKnown RBP18.76■□□□□ 0.59
COL18A1-202ENST00000355480 MBL2P11226 248 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-202ENST00000355480 CAPZA2P47755 286 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 POU4F1Q01851 419 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 DNAL1Q4LDG9 190 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 C16orf89Q6UX73 402 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 PPIL6Q8IXY8 311 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 ZNF513Q8N8E2 541 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-202ENST00000355480 F5H5T6 163 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 AIM2O14862 343 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 DDHD2O94830 711 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 PTPN7P35236 360 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 PRKCQQ04759 706 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 SLC25A13Q9UJS0 675 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 TRPM1Q7Z4N2 1603 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 TTLL13PA6NNM8 815 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 ATXN3P54252 364 aaPredicted RBP18.76■□□□□ 0.59
COL18A1-202ENST00000355480 BLOC1S5Q8TDH9 187 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 CARSP49589 748 aaKnown RBP18.76■□□□□ 0.59
COL18A1-202ENST00000355480 VPS37AQ8NEZ2 397 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 OR2W6PQ8NHA6 318 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 FBXO32Q969P5 355 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 GPRC5CQ9NQ84 441 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 DTNAQ9Y4J8 743 aa18.76■□□□□ 0.59
COL18A1-202ENST00000355480 PPP4CP60510 307 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 FBXO16Q8IX29 292 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-202ENST00000355480 SPASTQ9UBP0 616 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 RNF17Q9BXT8 1623 aaKnown RBP18.75■□□□□ 0.59
COL18A1-202ENST00000355480 KCNK10P57789 538 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 MROH9Q5TGP6 573 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 ACAD10Q6JQN1 1059 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 DTX3LQ8TDB6 740 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 MRPS31Q92665 395 aaKnown RBP18.75■□□□□ 0.59
COL18A1-202ENST00000355480 STAMBPL1Q96FJ0 436 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 CELF4Q9BZC1 486 aaKnown RBP18.75■□□□□ 0.59
COL18A1-202ENST00000355480 MTMR12Q9C0I1 747 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 TRIM16O95361 564 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 FAM107AO95990 144 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 VCAM1P19320 739 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 E4F1Q66K89 784 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-202ENST00000355480 ACOT1Q86TX2 421 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 ERO1BQ86YB8 467 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 YIPF3Q9GZM5 350 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 WWOXQ9NZC7 414 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 H2AFY2Q9P0M6 372 aaPredicted RBP18.75■□□□□ 0.59
COL18A1-202ENST00000355480 ALDH1A2O94788 518 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 FDPSP14324 419 aaKnown RBP18.75■□□□□ 0.59
COL18A1-202ENST00000355480 NBPF20Q3BBV1 942 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 RAD9BQ6WBX8 426 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 CACNA2D2Q9NY47 1150 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms