RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 VPS9D1Q9Y2B5 631 aa11.97□□□□□ -0.49
NUDCD3-202ENST00000355451 H3BUI4 141 aa11.97□□□□□ -0.49
NUDCD3-202ENST00000355451 RCVRNP35243 200 aa11.97□□□□□ -0.49
NUDCD3-202ENST00000355451 CYP20A1Q6UW02 462 aa11.97□□□□□ -0.49
NUDCD3-202ENST00000355451 TRMT11Q7Z4G4 463 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-202ENST00000355451 CACUL1Q86Y37 369 aa11.97□□□□□ -0.49
NUDCD3-202ENST00000355451 RACGAP1Q9H0H5 632 aa11.97□□□□□ -0.49
NUDCD3-202ENST00000355451 TSC22D4Q9Y3Q8 395 aa11.97□□□□□ -0.49
NUDCD3-202ENST00000355451 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 TEX33O43247 280 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 PCSK1P29120 753 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 RAB2AP61019 212 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 PLOD1Q02809 727 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 PDIA2Q13087 525 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 TRIM25Q14258 630 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 UGP2Q16851 508 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 IPMKQ8NFU5 416 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 OMDQ99983 421 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 HACL1Q9UJ83 578 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 EIF3LQ9Y262 564 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 SLC16A4O15374 487 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 OR6B1O95007 311 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 PLIN5Q00G26 463 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 SPP2Q13103 211 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 GALNTL6Q49A17 601 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 PADI6Q6TGC4 694 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 OLFM3Q96PB7 478 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 RNF146Q9NTX7 359 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 PARVAQ9NVD7 372 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 FANCLQ9NW38 375 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 MSH4O15457 936 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 TAP1Q03518 808 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 HIC1Q14526 733 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 NAA30Q147X3 362 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 SHQ1Q6PI26 577 aaKnown RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 PMM1Q92871 262 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 ZNF512BQ96KM6 892 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 SPATA9Q9BWV2 254 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 HOXA7P31268 230 aaPredicted RBP11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 NUDT2P50583 147 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 RNF112Q9ULX5 631 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 RIMS2Q9UQ26 1411 aa11.96□□□□□ -0.49
NUDCD3-202ENST00000355451 FANCAO15360 1455 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 MYL4P12829 197 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 VAV1P15498 845 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 ATP5F1P24539 256 aaPredicted RBP11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 THPOP40225 353 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 NLRP11P59045 1033 aaKnown RBP11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 CCDC184Q52MB2 194 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 AGGF1Q8N302 714 aaeCLIP11.96□□□□□ -0.53e-7■■■■□ 23.8
NUDCD3-202ENST00000355451 ACAD9Q9H845 621 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 TBC1D22BQ9NU19 505 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 CDC23Q9UJX2 597 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 VGLL3A8MV65 326 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 EEF2KO00418 725 aaKnown RBP11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 MTA2O94776 668 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 CD4P01730 458 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 GCLMP48507 274 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 PRELPP51888 382 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 EIF3EP60228 445 aaKnown RBP11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 TMC7Q7Z402 723 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 SF3B1O75533 1304 aaKnown RBP eCLIP11.96□□□□□ -0.52e-6■■■■■ 171.4
NUDCD3-202ENST00000355451 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 TCEA3O75764 348 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 OR7A10O76100 309 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 PRR29P0C7W0 189 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 PUDPQ08623 228 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 FUT11Q495W5 492 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 SMYD4Q8IYR2 804 aaPredicted RBP11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 C11orf70Q9BRQ4 267 aa11.96□□□□□ -0.5
NUDCD3-202ENST00000355451 CHP2O43745 196 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 IGHDP01880 384 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 ALBP02768 609 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 PTK6Q13882 451 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 USP41Q3LFD5 358 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 PYHIN1Q6K0P9 492 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 PROSER1Q86XN7 944 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 ARRDC4Q8NCT1 418 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 SCFD2Q8WU76 684 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 TUBGCP4Q9UGJ1 667 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 LRCH1Q9Y2L9 728 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 hCG_1984214I3L0E3 225 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 CELF2O95319 508 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 SKIV2L2P42285 1042 aaKnown RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 MSANTD1Q6ZTZ1 278 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 KLHL23Q8NBE8 558 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 TRPC4APQ8TEL6 797 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 SUCLG2Q96I99 432 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 MCCC2Q9HCC0 563 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 MLXIPLQ9NP71 852 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 A0A088AWK7 358 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 ZC3H11AO75152 810 aaKnown RBP eCLIP11.95□□□□□ -0.51e-13■■■■■ 30.4
NUDCD3-202ENST00000355451 ZNF10P21506 573 aaPredicted RBP11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 CAV3P56539 151 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 COPZ1P61923 177 aa11.95□□□□□ -0.5
NUDCD3-202ENST00000355451 P3H1Q32P28 736 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms