RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TAF5Q15542 800 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 PTPN20Q4JDL3 420 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 ECHDC2Q86YB7 292 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 WDR49Q8IV35 697 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 TMEM192Q8IY95 271 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 KLRG1Q96E93 195 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 SMC6Q96SB8 1091 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 PHIPQ8WWQ0 1821 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 KRT3P12035 628 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 EZRP15311 586 aaKnown RBP20.59■□□□□ 0.89
COL13A1-201ENST00000354547 SGSM1Q2NKQ1 1148 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 HSPH1Q92598 858 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 BTBD7Q9P203 1132 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 CYTH4Q9UIA0 394 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 GRID1Q9ULK0 1009 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 ITGBL1O95965 494 aaPredicted RBP20.59■□□□□ 0.89
COL13A1-201ENST00000354547 RPS12P25398 132 aaKnown RBP20.59■□□□□ 0.89
COL13A1-201ENST00000354547 PSMC1P62191 440 aaKnown RBP20.59■□□□□ 0.89
COL13A1-201ENST00000354547 MAPK6Q16659 721 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 ACCSLQ4AC99 568 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 CENPUQ71F23 418 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 ACO2Q99798 780 aaKnown RBP20.59■□□□□ 0.89
COL13A1-201ENST00000354547 TMEM134Q9H6X4 195 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 ZNF112Q9UJU3 913 aa20.59■□□□□ 0.89
COL13A1-201ENST00000354547 PGK2P07205 417 aa20.58■□□□□ 0.89
COL13A1-201ENST00000354547 CTCFP49711 727 aaPredicted RBP20.58■□□□□ 0.89
COL13A1-201ENST00000354547 TFDP1Q14186 410 aa20.58■□□□□ 0.89
COL13A1-201ENST00000354547 PIGHQ14442 188 aaPredicted RBP20.58■□□□□ 0.89
COL13A1-201ENST00000354547 MTFR1Q15390 333 aa20.58■□□□□ 0.89
COL13A1-201ENST00000354547 OASLQ15646 514 aaKnown RBP20.58■□□□□ 0.89
COL13A1-201ENST00000354547 MSS51Q4VC12 460 aa20.58■□□□□ 0.89
COL13A1-201ENST00000354547 RNASEH2BQ5TBB1 312 aaKnown RBP20.58■□□□□ 0.89
COL13A1-201ENST00000354547 KIAA0319LQ8IZA0 1049 aa20.58■□□□□ 0.89
COL13A1-201ENST00000354547 EURLQ9NYK6 297 aa20.58■□□□□ 0.89
COL13A1-201ENST00000354547 OGTO15294 1046 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 RFC5P40937 340 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 BNIP1Q12981 228 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 TARBP2Q15633 366 aaKnown RBP20.58■□□□□ 0.88
COL13A1-201ENST00000354547 SLC1A5Q15758 541 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 HSDL1Q3SXM5 330 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 PREPLQ4J6C6 727 aaPredicted RBP20.58■□□□□ 0.88
COL13A1-201ENST00000354547 GIMAP7Q8NHV1 300 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 STAMBPL1Q96FJ0 436 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 CALN1Q9BXU9 219 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 RXFP1Q9HBX9 757 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 ALG13Q9NP73 1137 aaKnown RBP20.58■□□□□ 0.88
COL13A1-201ENST00000354547 PHTF1Q9UMS5 762 aa20.58■□□□□ 0.88
COL13A1-201ENST00000354547 ATP2A1O14983 1001 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 MAFO75444 373 aaPredicted RBP20.57■□□□□ 0.88
COL13A1-201ENST00000354547 HIF1AQ16665 826 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 GALNTL6Q49A17 601 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 FNBP1LQ5T0N5 605 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 FAM160B1Q5W0V3 765 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 EEF1DP3Q658K8 133 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 ARFGAP1Q8N6T3 406 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 UBR7Q8N806 425 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 C12orf42Q96LP6 360 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 METTL5Q9NRN9 209 aaKnown RBP20.57■□□□□ 0.88
COL13A1-201ENST00000354547 PRKAG3Q9UGI9 489 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 RLFQ13129 1914 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 TCRBV5S1A1TA0A578 114 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 SOWAHBA6NEL2 793 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 FAM189A1O60320 539 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 MORF4L2Q15014 288 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 BBS9Q3SYG4 887 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 CCHCR1Q8TD31 782 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 PYROXD1Q8WU10 500 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 RSAD2Q8WXG1 361 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 SEPT1Q8WYJ6 367 aa20.57■□□□□ 0.88
COL13A1-201ENST00000354547 MAK16Q9BXY0 300 aaKnown RBP20.57■□□□□ 0.88
COL13A1-201ENST00000354547 TCRBV7S3A2A0A539 114 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 NOP56O00567 594 aaKnown RBP20.56■□□□□ 0.88
COL13A1-201ENST00000354547 ASMTLO95671 621 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 CXCL8P10145 99 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 KRT4P19013 534 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 MCL1Q07820 350 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 WDR78Q5VTH9 848 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 HHATQ5VTY9 493 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 VSIG1Q86XK7 387 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 ZBTB8OSQ8IWT0 167 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 NCAPGQ9BPX3 1015 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 ETNK1Q9HBU6 452 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 CFAP73A6NFT4 308 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 LRCH4O75427 683 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 ARIH2O95376 493 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 ICAM3P32942 547 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 ASPAP45381 313 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 IGBP1P78318 339 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 SPARCL1Q14515 664 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 ZPBP2Q6X784 338 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 RFX6Q8HWS3 928 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 FAM71DQ8N9W8 422 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 DNERQ8NFT8 737 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 AGAP11Q8TF27 550 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 CPXM1Q96SM3 734 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 HMGXB4Q9UGU5 601 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 LSM8O95777 96 aaKnown RBP20.56■□□□□ 0.88
COL13A1-201ENST00000354547 GPX6P59796 221 aa20.56■□□□□ 0.88
COL13A1-201ENST00000354547 BASP1P80723 227 aaKnown RBP20.56■□□□□ 0.88
COL13A1-201ENST00000354547 GADL1Q6ZQY3 521 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms