RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 UROC1Q96N76 676 aa21.76■■□□□ 1.07
TRIM4-202ENST00000354241 MRPL47Q9HD33 250 aaKnown RBP21.76■■□□□ 1.07
TRIM4-202ENST00000354241 KCNK3O14649 394 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 TADA3O75528 432 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 B3GAT3O94766 335 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 PTPN20Q4JDL3 420 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 PAN2Q504Q3 1202 aaKnown RBP21.75■■□□□ 1.07
TRIM4-202ENST00000354241 NOMO2Q5JPE7 1267 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 CYP4A22Q5TCH4 519 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 PLEKHA7Q6IQ23 1121 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 PAWRQ96IZ0 340 aaKnown RBP21.75■■□□□ 1.07
TRIM4-202ENST00000354241 C11orf49Q9H6J7 331 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 PARVAQ9NVD7 372 aa21.75■■□□□ 1.07
TRIM4-202ENST00000354241 CTAGE15A4D2H0 777 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 CTAGE8P0CG41 777 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 MAMLD1Q13495 774 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 NAA30Q147X3 362 aaPredicted RBP21.74■■□□□ 1.07
TRIM4-202ENST00000354241 DEFB128Q7Z7B8 93 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 CTAGE6Q86UF2 777 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 CREG2Q8IUH2 290 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 CTAGE4Q8IX94 777 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 CRYBG2Q8N1P7 616 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 MSANTD4Q8NCY6 345 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 HES6Q96HZ4 224 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 TRIM7Q9C029 511 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 SYNCQ9H7C4 482 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 PCDHB7Q9Y5E2 793 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 GJB6O95452 261 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 COMTP21964 271 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 GPD2P43304 727 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 CCDC181Q5TID7 509 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 DNAJC24Q6P3W2 148 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 HASPINQ8TF76 798 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 TNIP3Q96KP6 325 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 CPXM1Q96SM3 734 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 ELAC1Q9H777 363 aaKnown RBP21.74■■□□□ 1.07
TRIM4-202ENST00000354241 TMEM39AQ9NV64 488 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 HESX1Q9UBX0 185 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 STRIP2Q9ULQ0 834 aa21.74■■□□□ 1.07
TRIM4-202ENST00000354241 TIMM13Q9Y5L4 95 aaPredicted RBP21.74■■□□□ 1.07
TRIM4-202ENST00000354241 EFCAB8A8MWE9 144 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 I3L4J1 428 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 PARNO95453 639 aaKnown RBP21.73■■□□□ 1.07
TRIM4-202ENST00000354241 FAM163BP0C2L3 166 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 CCDC130P13994 396 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 PDCLQ13371 301 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 TIGD5Q53EQ6 642 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 ARHGAP17Q68EM7 881 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 ABI1Q8IZP0 508 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 TJP2Q9UDY2 1190 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 LRFN2Q9ULH4 789 aa21.73■■□□□ 1.07
TRIM4-202ENST00000354241 PDE2AO00408 941 aaPredicted RBP21.72■■□□□ 1.07
TRIM4-202ENST00000354241 CXCL10P02778 98 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 ACAT1P24752 427 aaKnown RBP21.72■■□□□ 1.07
TRIM4-202ENST00000354241 ADORA2BP29275 332 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 BRCC3P46736 316 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 AARSP49588 968 aaKnown RBP eCLIP21.72■■□□□ 1.07
TRIM4-202ENST00000354241 PSMC1P62191 440 aaKnown RBP21.72■■□□□ 1.07
TRIM4-202ENST00000354241 RNASELQ05823 741 aaKnown RBP21.72■■□□□ 1.07
TRIM4-202ENST00000354241 ZNF280BQ86YH2 543 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 TMEM86AQ8N2M4 240 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 FEZF2Q8TBJ5 459 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 C18orf8Q96DM3 657 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 MS4A14Q96JA4 679 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 ST7Q9NRC1 585 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 DDX43Q9NXZ2 648 aaKnown RBP21.72■■□□□ 1.07
TRIM4-202ENST00000354241 EHD2Q9NZN4 543 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 KANSL3Q9P2N6 904 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 TBX21Q9UL17 535 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 MYO1FO00160 1098 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 GABRDO14764 452 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 SPOPO43791 374 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 DDHD2O94830 711 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 ERBB2P04626 1255 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 PFKMP08237 780 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 TEX35Q5T0J7 233 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 TTC30AQ86WT1 665 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 CPNE8Q86YQ8 564 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 B3GALNT2Q8NCR0 500 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 UBXN4Q92575 508 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 GOLGA1Q92805 767 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 TBC1D13Q9NVG8 400 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 SMARCAL1Q9NZC9 954 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 TSC2P49815 1807 aa21.72■■□□□ 1.07
TRIM4-202ENST00000354241 GOLGA8SH3BPF8 625 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 DDX3YO15523 660 aaKnown RBP21.71■■□□□ 1.07
TRIM4-202ENST00000354241 B4GALT3O60512 393 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 CLTBP09497 229 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 ODC1P11926 461 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 PAFAH1B1P43034 410 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 LHX1P48742 406 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 LRRC26Q2I0M4 334 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 ERCC6LQ2NKX8 1250 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 DCLRE1AQ6PJP8 1040 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 C3orf20Q8ND61 904 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 IPO4Q8TEX9 1081 aaKnown RBP21.71■■□□□ 1.07
TRIM4-202ENST00000354241 PBKQ96KB5 322 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 FAM193BQ96PV7 902 aaPredicted RBP21.71■■□□□ 1.07
TRIM4-202ENST00000354241 SELENOOQ9BVL4 669 aa21.71■■□□□ 1.07
TRIM4-202ENST00000354241 TCRBV5S1A1TA0A578 114 aa21.7■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms