RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 MMRN1Q13201 1228 aa18.93■□□□□ 0.62
CTSB-202ENST00000353047 SPOCD1Q6ZMY3 1216 aa18.93■□□□□ 0.62
CTSB-202ENST00000353047 TMEM130Q8N3G9 435 aa18.93■□□□□ 0.62
CTSB-202ENST00000353047 FAM149B1Q96BN6 582 aa18.93■□□□□ 0.62
CTSB-202ENST00000353047 PRR11Q96HE9 360 aaPredicted RBP18.93■□□□□ 0.62
CTSB-202ENST00000353047 TRIM56Q9BRZ2 755 aaKnown RBP18.93■□□□□ 0.62
CTSB-202ENST00000353047 VPS11Q9H270 941 aa18.93■□□□□ 0.62
CTSB-202ENST00000353047 SMG5Q9UPR3 1016 aaKnown RBP18.93■□□□□ 0.62
CTSB-202ENST00000353047 ECM29Q5VYK3 1845 aa18.93■□□□□ 0.62
CTSB-202ENST00000353047 DGKIO75912 1065 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 HMGCS2P54868 508 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 SLC8A3P57103 927 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 C16orf46Q6P387 395 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 LMO3Q8TAP4 145 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 RPAP3Q9H6T3 665 aaPredicted RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 PAPOLBQ9NRJ5 636 aaKnown RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 TJP2Q9UDY2 1190 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 SRRM3A6NNA2 597 aaPredicted RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 M0QYV0 167 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 NEMP1O14524 444 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 DNALI1O14645 258 aaPredicted RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 ASNSP08243 561 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 KBTBD12Q3ZCT8 623 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 NDUFAF2Q8N183 169 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 RNF148Q8N7C7 305 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 TMEM161BQ8NDZ6 487 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 SYTL5Q8TDW5 730 aaPredicted RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 VTI1AQ96AJ9 217 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 NSL1Q96IY1 281 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 TTC25Q96NG3 672 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 UNKQ9C0B0 810 aaKnown RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 AGO4Q9HCK5 861 aaKnown RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 NR2E3Q9Y5X4 410 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 TRPM3Q9HCF6 1732 aaPredicted RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 CYB561D2O14569 222 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 ATP5HO75947 161 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 TCN1P20061 433 aaPredicted RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 YARSP54577 528 aaKnown RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 CRADDP78560 199 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 POLNQ7Z5Q5 900 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 FAM160B2Q86V87 743 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 ADPGKQ9BRR6 497 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 ZNF70Q9UC06 446 aaPredicted RBP18.92■□□□□ 0.62
CTSB-202ENST00000353047 NUB1Q9Y5A7 615 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 WASF2Q9Y6W5 498 aa18.92■□□□□ 0.62
CTSB-202ENST00000353047 MYH11P35749 1972 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 CD48P09326 243 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 TDRD10Q5VZ19 366 aaKnown RBP18.91■□□□□ 0.62
CTSB-202ENST00000353047 CEP128Q6ZU80 1094 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 ANO5Q75V66 913 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 RNF149Q8NC42 400 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 AGAP3Q96P47 875 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 PIDD1Q9HB75 910 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 CYP39A1Q9NYL5 469 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 SPECC1L-ADORA2AF8WAN1 911 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 PSAPP07602 524 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 GLRA2P23416 452 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 SOX11P35716 441 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 RANBP1P43487 201 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 AQP5P55064 265 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 RASA2Q15283 850 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 TAF5Q15542 800 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 DPY19L2P1Q6NXN4 242 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 RCOR2Q8IZ40 523 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 DEPDC1BQ8WUY9 529 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 KBTBD13C9JR72 458 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 FCHO1O14526 889 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 FDX1P10109 184 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 POLR2BP30876 1174 aaKnown RBP18.91■□□□□ 0.62
CTSB-202ENST00000353047 GDF10P55107 478 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.91■□□□□ 0.62
CTSB-202ENST00000353047 CRELD2Q6UXH1 353 aaPredicted RBP18.91■□□□□ 0.62
CTSB-202ENST00000353047 PPP1R13LQ8WUF5 828 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 MTBPQ96DY7 904 aa18.91■□□□□ 0.62
CTSB-202ENST00000353047 CCNE2O96020 404 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 PTPN4P29074 926 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 RFC1P35251 1148 aaPredicted RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 MSX2P35548 267 aaPredicted RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 TNFSF9P41273 254 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 ZNF200P98182 395 aaPredicted RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 IZUMO2Q6UXV1 221 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 CRLF3Q8IUI8 442 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 PYDC1Q8WXC3 89 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 DDX27Q96GQ7 796 aaKnown RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 PICK1Q9NRD5 415 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.9■□□□□ 0.628e-9■□□□□ 10.2
CTSB-202ENST00000353047 ZC3H7BQ9UGR2 993 aaKnown RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 FEM1BQ9UK73 627 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 TMX2Q9Y320 296 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 C2CD2Q9Y426 696 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 ASTN2O75129 1339 aaPredicted RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 PRPSAP2O60256 369 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 PEX6Q13608 980 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 RASSF3Q86WH2 238 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 NCAPG2Q86XI2 1143 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 FIZ1Q96SL8 496 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 JPH1Q9HDC5 661 aaPredicted RBP18.9■□□□□ 0.62
CTSB-202ENST00000353047 NDE1Q9NXR1 346 aa18.9■□□□□ 0.62
CTSB-202ENST00000353047 IL1RAPL1Q9NZN1 696 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms