RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 LVRNQ6Q4G3 990 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 ANKMY2Q8IV38 441 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 TMEM35BQ8NCS4 154 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 FBXO41Q8TF61 875 aa25.81■■□□□ 1.72
CPNE1-202ENST00000352393 ZNF75CPQ92670 426 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-202ENST00000352393 IFNB1P01574 187 aa25.8■■□□□ 1.72
CPNE1-202ENST00000352393 OATP04181 439 aa25.8■■□□□ 1.72
CPNE1-202ENST00000352393 CDH5P33151 784 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-202ENST00000352393 EFTUD2Q15029 972 aaKnown RBP eCLIP25.8■■□□□ 1.726e-8■■■■□ 26.4
CPNE1-202ENST00000352393 ZC3H12AQ5D1E8 599 aaKnown RBP25.8■■□□□ 1.72
CPNE1-202ENST00000352393 POLNQ7Z5Q5 900 aa25.8■■□□□ 1.72
CPNE1-202ENST00000352393 PCGF5Q86SE9 256 aa25.8■■□□□ 1.72
CPNE1-202ENST00000352393 ZNF526Q8TF50 670 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-202ENST00000352393 MRRFQ96E11 262 aaKnown RBP25.8■■□□□ 1.72
CPNE1-202ENST00000352393 ZNRF3Q9ULT6 936 aa25.8■■□□□ 1.72
CPNE1-202ENST00000352393 PEX11AO75192 247 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 KRT4P19013 534 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 GAD2Q05329 585 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 BRSK2Q8IWQ3 736 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 ATP11CQ8NB49 1132 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 WDR83Q9BRX9 315 aaKnown RBP25.79■■□□□ 1.72
CPNE1-202ENST00000352393 ZNF518BQ9C0D4 1074 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 RNPEPL1Q9HAU8 725 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 ZMYND8Q9ULU4 1186 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-202ENST00000352393 CEP83Q9Y592 693 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 SNCAIPQ9Y6H5 919 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 GOLGB1Q14789 3259 aaKnown RBP25.79■■□□□ 1.72
CPNE1-202ENST00000352393 TNS1Q9HBL0 1735 aaKnown RBP25.79■■□□□ 1.72
CPNE1-202ENST00000352393 GOLGA8SH3BPF8 625 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 GOLGA8MH3BSY2 632 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 TRAFD1O14545 582 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-202ENST00000352393 SEZ6Q53EL9 994 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 ANKRD22Q5VYY1 191 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 PPIL6Q8IXY8 311 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 WDTC1Q8N5D0 677 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 FAM13CQ8NE31 585 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 MZB1Q8WU39 189 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 CPT1BQ92523 772 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 ANKRD27Q96NW4 1050 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 MYOZ2Q9NPC6 264 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 NKX1-2Q9UD57 310 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-202ENST00000352393 EFR3BQ9Y2G0 817 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 MAFBQ9Y5Q3 323 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-202ENST00000352393 LOC285556D6RIA3 1793 aa25.79■■□□□ 1.72
CPNE1-202ENST00000352393 C2CD2LO14523 706 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 STAM2O75886 525 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 GNAZP19086 355 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 PHBP35232 272 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 CTCFP49711 727 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-202ENST00000352393 PLCB3Q01970 1234 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 SLC45A4Q5BKX6 768 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 GPAT2Q6NUI2 795 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 CCDC125Q86Z20 511 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 TTLL6Q8N841 843 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 NAT8LQ8N9F0 302 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 ZNF398Q8TD17 642 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 ACSS3Q9H6R3 686 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 CST3P01034 146 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-202ENST00000352393 AP3M2P53677 418 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 OAZ1P54368 228 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 TFDP1Q14186 410 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 MSS51Q4VC12 460 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 ADGRD1Q6QNK2 874 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 WDR49Q8IV35 697 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 TBC1D10AQ9BXI6 508 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 ADAM33Q9BZ11 813 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 TMEM134Q9H6X4 195 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 ZNF214Q9UL59 606 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-202ENST00000352393 PCDHGC3Q9UN70 934 aa25.78■■□□□ 1.72
CPNE1-202ENST00000352393 E7ESA3 106 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 ADRA1DP25100 572 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 SSTR1P30872 391 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 GDF10P55107 478 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 ARL4CP56559 192 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 SLC25A11Q02978 314 aaKnown RBP25.77■■□□□ 1.72
CPNE1-202ENST00000352393 MAPK6Q16659 721 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 GNPTABQ3T906 1256 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 FNBP1LQ5T0N5 605 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 NLRP9Q7RTR0 991 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 ZNF276Q8N554 614 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 ACTL9Q8TC94 416 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 PAFAH2Q99487 392 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 FRMD8P1Q9BZ68 369 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-202ENST00000352393 NIF3L1Q9GZT8 377 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 ZNF302Q9NR11 478 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 CISHQ9NSE2 258 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 CYP39A1Q9NYL5 469 aa25.77■■□□□ 1.72
CPNE1-202ENST00000352393 FAM189A1O60320 539 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 HARSP12081 509 aaKnown RBP25.76■■□□□ 1.71
CPNE1-202ENST00000352393 OTUD4Q01804 1114 aaKnown RBP25.76■■□□□ 1.71
CPNE1-202ENST00000352393 SP2Q02086 613 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 CYP4A22Q5TCH4 519 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 ZNF449Q6P9G9 518 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 NIM1KQ8IY84 436 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 PYROXD1Q8WU10 500 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 ECM2O94769 699 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-202ENST00000352393 ATG7O95352 703 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 CBX6O95503 412 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 GM2AP17900 193 aa25.76■■□□□ 1.71
CPNE1-202ENST00000352393 EIF4BP23588 611 aaKnown RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms