RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 DHX34Q14147 1143 aaKnown RBP14.36□□□□□ -0.11
SMC6-201ENST00000351948 RASSF3Q86WH2 238 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 ARHGAP24Q8N264 748 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 STKLD1Q8NE28 680 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 PPP2R3CQ969Q6 453 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 RBM15Q96T37 977 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMC6-201ENST00000351948 WDCPQ9H6R7 721 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 IRAK4Q9NWZ3 460 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 CDY2AQ9Y6F7 541 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 TXNDC9O14530 226 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 SCNN1GP51170 649 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 TWF1Q12792 350 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 EFEMP1Q12805 493 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 FAM171A1Q5VUB5 890 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 TDRD10Q5VZ19 366 aaKnown RBP14.36□□□□□ -0.11
SMC6-201ENST00000351948 CEP120Q8N960 986 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 AGR3Q8TD06 166 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 RPRD1AQ96P16 312 aaPredicted RBP14.36□□□□□ -0.11
SMC6-201ENST00000351948 SNCAIPQ9Y6H5 919 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 ADRB2P07550 413 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 ZNF280AP59817 542 aaPredicted RBP14.36□□□□□ -0.11
SMC6-201ENST00000351948 OVOS1Q6IE37 1185 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMC6-201ENST00000351948 CFAP61Q8NHU2 1237 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 FAM172AQ8WUF8 416 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 ZNF606Q8WXB4 792 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 TSPAN16Q9UKR8 245 aa14.36□□□□□ -0.11
SMC6-201ENST00000351948 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
SMC6-201ENST00000351948 A0A0G2JND7 137 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 KLC3Q6P597 504 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 JAMLQ86YT9 394 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 TMEM161BQ8NDZ6 487 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 IPMKQ8NFU5 416 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 ADAM32Q8TC27 787 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 TNFRSF25Q93038 417 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 CHMP2BQ9UQN3 213 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 CNTNAP2Q9UHC6 1331 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 BAG2O95816 211 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 BRAFP15056 766 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 EIF4BP23588 611 aaKnown RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 CARSP49589 748 aaKnown RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 HARS2P49590 506 aaKnown RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 PAPOLAP51003 745 aaKnown RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 TMTC4Q5T4D3 741 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 ZPBP2Q6X784 338 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 EPM2AIP1Q7L775 607 aaPredicted RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 BRSK2Q8IWQ3 736 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 ATP11CQ8NB49 1132 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 APBA2Q99767 749 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 ELAC2Q9BQ52 826 aaKnown RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 FGFBP2Q9BYJ0 223 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 NUDT5Q9UKK9 219 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 E5RI56 91 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 RAD51Q06609 339 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 BTG3Q14201 252 aaPredicted RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 TADA2BQ86TJ2 420 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 RSAD1Q9HA92 442 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 ZFATQ9P243 1243 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 ANKRD65E5RJM6 399 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 CAV1Q03135 178 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 YWHAHQ04917 246 aaPredicted RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 SYT15Q9BQS2 421 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 XPO7Q9UIA9 1087 aaKnown RBP14.35□□□□□ -0.11
SMC6-201ENST00000351948 TRPV2Q9Y5S1 764 aa14.35□□□□□ -0.11
SMC6-201ENST00000351948 C3orf70A6NLC5 250 aaPredicted RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 HMGB1P1B2RPK0 211 aaPredicted RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 FARP2O94887 1054 aaPredicted RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 URODP06132 367 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 RASSF2P50749 326 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 TKTL1P51854 596 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 JAG1P78504 1218 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 SNX17Q15036 470 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 SPRYD7Q5W111 196 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 RIN2Q8WYP3 895 aaPredicted RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 NDFIP2Q9NV92 336 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 ROBO3Q96MS0 1386 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 A0A087WUV0 522 aaPredicted RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 HSPA4LO95757 839 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 NFICP08651 508 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 FKBP1BP68106 108 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 FOXD4Q12950 439 aaPredicted RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 MAPRE1Q15691 268 aaKnown RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 EEF1DP3Q658K8 133 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 FRA10AC1Q70Z53 315 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 RNPEPQ9H4A4 650 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 CYP4F11Q9HBI6 524 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 NRCAMQ92823 1304 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 BCAT1P54687 386 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 SH2D4BQ5SQS7 431 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 USP38Q8NB14 1042 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 VAV3Q9UKW4 847 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 MAPTP10636 758 aaKnown RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 TYK2P29597 1187 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 WEE1P30291 646 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 PCK1P35558 622 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 RXFP2Q8WXD0 754 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms