RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 NR1H2P55055 460 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 ARL4CP56559 192 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 YWHAGP61981 247 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 WASHC5Q12768 1159 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 APOFQ13790 326 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 METTL24Q5JXM2 366 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 NIPAL1Q6NVV3 410 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 BORAQ6PGQ7 559 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 DCLRE1AQ6PJP8 1040 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 XKR5Q6UX68 686 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 RFPL4BQ6ZWI9 263 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 Q8N9G6 341 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 FBXL8Q96CD0 374 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 ZNF512Q96ME7 567 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 KIAA1586Q9HCI6 787 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 GID8Q9NWU2 228 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 AJAP1Q9UKB5 411 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 UBR2Q8IWV8 1755 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 MCF2LO15068 1137 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 TNFAIP8O95379 198 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 CHRNB1P11230 501 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 RAG1P15918 1043 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 PHKA1P46020 1223 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 CDK9P50750 372 aaKnown RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 C21orf59P57076 290 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 PTK7Q13308 1070 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 SLC27A3Q5K4L6 730 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 RABGAP1LQ5R372 815 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 HP1BP3Q5SSJ5 553 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 USP43Q70EL4 1123 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 CYFIP1Q7L576 1253 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 GRIN3AQ8TCU5 1115 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 EME1Q96AY2 570 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 OXNAD1Q96HP4 312 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 BIRC8Q96P09 236 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 GREM2Q9H772 168 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 NCKIPSDQ9NZQ3 722 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 DTNAQ9Y4J8 743 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 WNK3Q9BYP7 1800 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 SOBPA7XYQ1 873 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 TCEA3O75764 348 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 CRTAMO95727 393 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 ENO2P09104 434 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 PDE6AP16499 860 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 ZNF12P17014 697 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 ITGA8P53708 1063 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 RPS3AP61247 264 aaKnown RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 PSMC1P62191 440 aaKnown RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 GJB7Q6PEY0 223 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 MIER3Q7Z3K6 550 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 FAM20CQ8IXL6 584 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 ZNF398Q8TD17 642 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 PTCD2Q8WV60 388 aaKnown RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 TTC25Q96NG3 672 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 STRBPQ96SI9 672 aaKnown RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 CLK4Q9HAZ1 481 aaKnown RBP11.16□□□□□ -0.62
CAPN3-203ENST00000349748 ACP6Q9NPH0 428 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 EBF1Q9UH73 591 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 SNX9Q9Y5X1 595 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 A0A0A6YYK5 440 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-203ENST00000349748 GSTTP1A0A1W2PQM5 241 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 TCRBV5S4A2TA0A5A2 114 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 TMEM114B3SHH9 223 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 PFDN6O15212 129 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 PRPF4O43172 522 aaKnown RBP eCLIP11.15□□□□□ -0.62
CAPN3-203ENST00000349748 MYL2P10916 166 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 UBL4AP11441 157 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 UCHL3P15374 230 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 NELFEP18615 380 aaKnown RBP11.15□□□□□ -0.62
CAPN3-203ENST00000349748 MXI1P50539 228 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 EPHB1P54762 984 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 KRT17Q04695 432 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 LRRC63Q05C16 580 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 PPATQ06203 517 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 OASLQ15646 514 aaKnown RBP11.15□□□□□ -0.62
CAPN3-203ENST00000349748 TIGD2Q4W5G0 525 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 C6orf52Q5T4I8 152 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 RHBDF2Q6PJF5 856 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 ADGRG6Q86SQ4 1221 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 GLYCTKQ8IVS8 523 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 PROM2Q8N271 834 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 EFCAB3Q8N7B9 438 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 C1orf54Q8WWF1 131 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 HPS1Q92902 700 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 ZNF696Q9H7X3 374 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 TRMT112Q9UI30 125 aaKnown RBP11.15□□□□□ -0.62
CAPN3-203ENST00000349748 COG5Q9UP83 839 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 NIP7Q9Y221 180 aaKnown RBP eCLIP11.15□□□□□ -0.62
CAPN3-203ENST00000349748 TNKSO95271 1327 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 LOC105371267A0A1B0GV96 52 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 FAM237BA0A1B0GVD1 139 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 EXOC1LA0A1B0GW35 172 aa11.15□□□□□ -0.62
CAPN3-203ENST00000349748 MYMKA6NI61 221 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms