RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 H0YCG3 227 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 MAGEB2O15479 319 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 TYROBPO43914 113 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 CST8O60676 142 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 PTPRAP18433 802 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 RAP1GAPP47736 663 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 TFAMQ00059 246 aaKnown RBP19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 ENPEPQ07075 957 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 MORF4L2Q15014 288 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 PPP1R15BQ5SWA1 713 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 ZNF280CQ8ND82 737 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 ZNF570Q96NI8 536 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 LRRC37BQ96QE4 947 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 NXF1Q9UBU9 619 aaKnown RBP19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 RABGEF1Q9UJ41 708 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 KIAA1217Q5T5P2 1943 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 PRPF4O43172 522 aaKnown RBP eCLIP19.03■□□□□ 0.647e-7■■■■□ 21.5
PTP4A3-202ENST00000349124 EDF1O60869 148 aaKnown RBP19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 PIGRP01833 764 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 ADRA1DP25100 572 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 ACVR2BQ13705 512 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 NAA25Q14CX7 972 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 DRICH1Q6PGQ1 229 aaPredicted RBP19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 C3orf62Q6ZUJ4 267 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 CENPUQ71F23 418 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 OTOAQ7RTW8 1153 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 RHPN2Q8IUC4 686 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 LRRC8CQ8TDW0 803 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 CPT1BQ92523 772 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 PLCD4Q9BRC7 762 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 IMPG2Q9BZV3 1241 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 POLIQ9UNA4 740 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 AGTPBP1Q9UPW5 1226 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 DRG1Q9Y295 367 aaKnown RBP19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 CEP83Q9Y592 693 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 MARK3P27448 753 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 CDH8P55286 799 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 PDK4Q16654 411 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 PTPN20Q4JDL3 420 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 HHATQ5VTY9 493 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 TDRPQ86YL5 185 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 UNC45BQ8IWX7 931 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 RIBC1Q8N443 379 aaPredicted RBP19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 CEP120Q8N960 986 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 TMEM35BQ8NCS4 154 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 SLC35B2Q8TB61 432 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 ZNF75CPQ92670 426 aaPredicted RBP19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 GRAMD1AQ96CP6 724 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 DCTN4Q9UJW0 460 aa19.03■□□□□ 0.64
PTP4A3-202ENST00000349124 LDHAP00338 332 aaKnown RBP19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 GJB1P08034 283 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 PSMA2P25787 234 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 PRKG1Q13976 671 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 HIF1AQ16665 826 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 GNPTABQ3T906 1256 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 NKD2Q969F2 451 aaPredicted RBP19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 NPHS2Q9NP85 383 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 SLC17A7Q9P2U7 560 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 FAM189A1O60320 539 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 CALB1P05937 261 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 CD19P15391 556 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 GM2AP17900 193 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 RPL22P35268 128 aaKnown RBP19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 THNSL1Q8IYQ7 743 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 LRRC71Q8N4P6 559 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 FBF1Q8TES7 1133 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 PYROXD1Q8WU10 500 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 TTC25Q96NG3 672 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 FOXP3Q9BZS1 431 aa19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 NOP53Q9NZM5 478 aaKnown RBP19.02■□□□□ 0.64
PTP4A3-202ENST00000349124 ADCY3O60266 1144 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 ITGAVP06756 1048 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 CCND1P24385 295 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 YARSP54577 528 aaKnown RBP19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 MCL1Q07820 350 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 SETDB1Q15047 1291 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 BBS9Q3SYG4 887 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 RAB6CQ53S08 254 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 RPAINQ86UA6 219 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 IGDCC3Q8IVU1 814 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 SLC7A6OSQ96CW6 309 aaPredicted RBP19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 RAB6CQ9H0N0 254 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 ACAD9Q9H845 621 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 FARP1Q9Y4F1 1045 aaPredicted RBP19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 AFG3L2Q9Y4W6 797 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 USH1CQ9Y6N9 552 aa19.02■□□□□ 0.63
PTP4A3-202ENST00000349124 LRCH4O75427 683 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 TMEM63AO94886 807 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 LRRC38Q5VT99 294 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 BRSK2Q8IWQ3 736 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 FAM71DQ8N9W8 422 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 FBXO36Q8NEA4 188 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 CCHCR1Q8TD31 782 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 C10orf82Q8WW14 230 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 MIEF2Q96C03 454 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 CDHR1Q96JP9 859 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 TEX13BQ9BXU2 312 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 PCDH9Q9HC56 1237 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 SKAP2O75563 359 aaPredicted RBP19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 TNFAIP1Q13829 316 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms