RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 MFAP3P55082 362 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 ADARP55265 1226 aaKnown RBP10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 PHEXP78562 749 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 PTP4A2Q12974 167 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 KLF1Q13351 362 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 MSLNQ13421 630 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 VPS72Q15906 364 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 CLEC16AQ2KHT3 1053 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 EFHC2Q5JST6 749 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 APOBEC3HQ6NTF7 200 aaKnown RBP10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 ZNF746Q6NUN9 644 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 B3GNT9Q6UX72 402 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 SMIM5Q71RC9 77 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 DHDDSQ86SQ9 333 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 ULK2Q8IYT8 1036 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 TTC1Q99614 292 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 IQCGQ9H095 443 aaKnown RBP10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 TBCCD1Q9NVR7 557 aa10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 CHORDC1Q9UHD1 332 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 COL2A1P02458 1487 aaPredicted RBP10.84□□□□□ -0.67
CHRNA1-202ENST00000348749 ARHGEF35A5YM69 484 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 SFI1A8K8P3 1242 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 DNALI1O14645 258 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 NDC80O14777 642 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 GAS7O60861 476 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 OR6B1O95007 311 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 BAG2O95816 211 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 DHRS4L1P0CG22 281 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 BMP3P12645 472 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 IDO1P14902 403 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 VCLP18206 1134 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 GTF2H1P32780 548 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 RPL5P46777 297 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 ARL4CP56559 192 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 TBL3Q12788 808 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 RASA3Q14644 834 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 COG2Q14746 738 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 PRKD1Q15139 912 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 SEPT7Q16181 437 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 P3H1Q32P28 736 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 UGT2A3Q6UWM9 527 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 CERS5Q8N5B7 392 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 SMYD1Q8NB12 490 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 RBM15BQ8NDT2 890 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 RSPH1Q8WYR4 309 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 SHC3Q92529 594 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 TRIM11Q96F44 468 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 BTBD9Q96Q07 612 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 RIT2Q99578 217 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 HERPUD2Q9BSE4 406 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 C1orf21Q9H246 121 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 USP29Q9HBJ7 922 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 S100A14Q9HCY8 104 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 AVENQ9NQS1 362 aaPredicted RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 SLC7A8Q9UHI5 535 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 R3HDM2Q9Y2K5 976 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 H3BRJ5 948 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 ALOX15BO15296 676 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 USP1O94782 785 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 NDUFB10O96000 172 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 SERPINB2P05120 415 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 HNRNPCP07910 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 CDK4P11802 303 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 YY1P25490 414 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 CD97P48960 835 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 EMP3P54852 163 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 DCTN2Q13561 401 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 PDK3Q15120 406 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 ADRM1Q16186 407 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 USH1GQ495M9 461 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 ANKRD20A4Q4UJ75 823 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 SFT2D3Q587I9 215 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 DUS1LQ6P1R4 473 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 RFX8Q6ZV50 586 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 TTC7BQ86TV6 843 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 SIAH1Q8IUQ4 282 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 BANPQ8N9N5 519 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 XXYLT1Q8NBI6 393 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 TCP10LQ8TDR4 215 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 GAB3Q8WWW8 586 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 MTBPQ96DY7 904 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 UIMC1Q96RL1 719 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 TEKT3Q9BXF9 490 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 KLHL4Q9C0H6 718 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 NMUR2Q9GZQ4 415 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 RBM38Q9H0Z9 239 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 PLK2Q9NYY3 685 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 TAGLN3Q9UI15 199 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 PAIP2BQ9ULR5 123 aaKnown RBP10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 COQ4Q9Y3A0 265 aa10.83□□□□□ -0.68
CHRNA1-202ENST00000348749 UBR3Q6ZT12 1888 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 PPEF1O14829 653 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 ATP5BP06576 529 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 SERPINB8P50452 374 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 MXI1P50539 228 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 PLOD1Q02809 727 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 TMEM62Q0P6H9 643 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 MPP3Q13368 585 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms