RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CD101Q93033 1021 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 C18orf8Q96DM3 657 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 CARD9Q9H257 536 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 INPP5FQ9Y2H2 1132 aa22.72■■□□□ 1.23
TSPAN3-202ENST00000346495 CCDC66A2RUB6 948 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 CASTOR2A6NHX0 329 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 NBNO60934 754 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 SETSIPP0DME0 302 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 TUSC3Q13454 348 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 FBXO46Q6PJ61 603 aaPredicted RBP22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 GLB1LQ6UWU2 654 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 ANKRD33Q7Z3H0 272 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 RASGEF1CQ8N431 466 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 NOA1Q8NC60 698 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 UBA3Q8TBC4 463 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 TNIP3Q96KP6 325 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 SENP8Q96LD8 212 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 MIS12Q9H081 205 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 SYNCQ9H7C4 482 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 EHD2Q9NZN4 543 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 HESX1Q9UBX0 185 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 PROSCO94903 275 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 PDGFRBP09619 1106 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 COL6A1P12109 1028 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 CTNNA1P35221 906 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 GABRB2P47870 512 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 C1QTNF8P60827 252 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 C2orf54Q08AI8 447 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 PDCLQ13371 301 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 ZNF268Q14587 947 aaPredicted RBP22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 PLEKHG4Q58EX7 1191 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 CYP4A22Q5TCH4 519 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 DSTYKQ6XUX3 929 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 TMEM86AQ8N2M4 240 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 SEPT8Q92599 483 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 ZNF333Q96JL9 665 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 CPXM1Q96SM3 734 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 TRIM7Q9C029 511 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 DPEP3Q9H4B8 488 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 FAM49BQ9NUQ9 324 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 SMARCAL1Q9NZC9 954 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 CACNG4Q9UBN1 327 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 IP6K2Q9UHH9 426 aa22.71■■□□□ 1.23
TSPAN3-202ENST00000346495 DNAH12Q6ZR08 3092 aa22.7■■□□□ 1.23
TSPAN3-202ENST00000346495 TANC1Q9C0D5 1861 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 TMEM191CA6NGB0 347 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 PGRMC1O00264 195 aaKnown RBP22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 LMO2P25791 158 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 MAN1A1P33908 653 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 PSMC1P62191 440 aaKnown RBP22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 PPP1R15BQ5SWA1 713 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 OSTM1Q86WC4 334 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 MMGT1Q8N4V1 131 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 IPO4Q8TEX9 1081 aaKnown RBP22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 APBB2Q92870 758 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.7■■□□□ 1.222e-7■■■■□ 20.1
TSPAN3-202ENST00000346495 TTC7AQ9ULT0 858 aaPredicted RBP22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 PCDHA3Q9Y5H8 950 aa22.7■■□□□ 1.22
TSPAN3-202ENST00000346495 DCDC2CA8MYV0 355 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 GABRDO14764 452 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 AARSP49588 968 aaKnown RBP eCLIP22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 MNX1P50219 401 aaPredicted RBP22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 ATN1P54259 1190 aaPredicted RBP22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 GPNMBQ14956 572 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 CLUL1Q15846 466 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 PKDCCQ504Y2 493 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 WSCD1Q658N2 575 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 DCUN1D2Q6PH85 259 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 URGCPQ8TCY9 931 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 ALG3Q92685 438 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 KRT35Q92764 455 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 TOX2Q96NM4 488 aa22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 ELAC1Q9H777 363 aaKnown RBP22.69■■□□□ 1.22
TSPAN3-202ENST00000346495 HCRTO43612 131 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 PARNO95453 639 aaKnown RBP22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 ERBB2P04626 1255 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 PFKMP08237 780 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 LHX1P48742 406 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 PEX5P50542 639 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 DCAF12L1Q5VU92 463 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 XYLT1Q86Y38 959 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 DNAJC5GQ8N7S2 189 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 C3orf58Q8NDZ4 430 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 DBF4BQ8NFT6 615 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 TMEM161AQ9NX61 479 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 KANSL3Q9P2N6 904 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 SIGLEC16A6NMB1 481 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 CAPN15O75808 1086 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 GJB6O95452 261 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 SNX16P57768 344 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 RPL7AP62424 266 aaKnown RBP22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 NOMO2Q5JPE7 1267 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 C1orf53Q5VUE5 145 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 CCDC70Q6NSX1 233 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 TTC30AQ86WT1 665 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 CPNE8Q86YQ8 564 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 B3GALNT2Q8NCR0 500 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 SPATA18Q8TC71 538 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 MCEEQ96PE7 176 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms