RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 SGPL1O95470 568 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 C16orf72Q14CZ0 275 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 STILQ15468 1287 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 ERMARDQ5T6L9 678 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 MMADHCQ9H3L0 296 aaPredicted RBP18.18■□□□□ 0.5
SPAST-202ENST00000345662 APPL1Q9UKG1 709 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 PIK3CDO00329 1044 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
SPAST-202ENST00000345662 SOX13Q9UN79 622 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 SOX11P35716 441 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 KCNK10P57789 538 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 DEPDC1Q5TB30 811 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 SLC26A11Q86WA9 606 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 CCDC60Q8IWA6 550 aaPredicted RBP18.17■□□□□ 0.5
SPAST-202ENST00000345662 SLC25A41Q8N5S1 370 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 GSTT1P30711 240 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 TPI1P60174 286 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 TBL3Q12788 808 aaKnown RBP18.17■□□□□ 0.5
SPAST-202ENST00000345662 SEPT8Q92599 483 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 ARAP3Q8WWN8 1544 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 ZSCAN9O15535 394 aaPredicted RBP18.17■□□□□ 0.5
SPAST-202ENST00000345662 H2AFYO75367 372 aaKnown RBP18.17■□□□□ 0.5
SPAST-202ENST00000345662 MYBL2P10244 700 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 CCNA1P78396 465 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 MTFR1Q15390 333 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 P3H2Q8IVL5 708 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 DEFB107AQ8IZN7 70 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 TAGAPQ8N103 731 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 EPAS1Q99814 870 aa18.17■□□□□ 0.5
SPAST-202ENST00000345662 ATXN2Q99700 1313 aaKnown RBP18.17■□□□□ 0.5
SPAST-202ENST00000345662 TMEM94Q12767 1356 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 MYO1GB0I1T2 1018 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 OPLAHO14841 1288 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 PSMG1O95456 288 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 GRK2P25098 689 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 RGS2P41220 211 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 GPAT2Q6NUI2 795 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 OXNAD1Q96HP4 312 aaPredicted RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 FAM210AQ96ND0 272 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 SH2D3AQ9BRG2 576 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 MCM8Q9UJA3 840 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 ALKQ9UM73 1620 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 IQCA1LA6NCM1 817 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 SLC37A4O43826 429 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 UNC5CO95185 931 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 LCP1P13796 627 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 SLC10A5Q5PT55 438 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 ZBTB49Q6ZSB9 765 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 DPP9Q86TI2 863 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 MYO1DO94832 1006 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 HSD17B4P51659 736 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 DCTN2Q13561 401 aaKnown RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 NKX1-1Q15270 411 aaPredicted RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 PCNX4Q63HM2 1172 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 CCDC81Q6ZN84 652 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 RFWD2Q8NHY2 731 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 ZNF669Q96BR6 464 aaPredicted RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 PAIP1Q9H074 479 aaKnown RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 EXOSC4Q9NPD3 245 aaKnown RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 CASS4Q9NQ75 786 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 SLC39A10Q9ULF5 831 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 PECAM1P16284 738 aaPredicted RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 TFE3P19532 575 aaPredicted RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 RASA1P20936 1047 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 FAM162AQ96A26 154 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 SP110Q9HB58 689 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 RNF146Q9NTX7 359 aa18.16■□□□□ 0.5
SPAST-202ENST00000345662 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.16■□□□□ 0.5
SPAST-202ENST00000345662 A0A0U1RQJ8 604 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 PEX5P50542 639 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 MAP3K7CLP57077 242 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 UBE3AQ05086 875 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 KRT72Q14CN4 511 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 Q3C1V9 767 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 TFDP3Q5H9I0 405 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 PDPK2PQ6A1A2 396 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 ASAP3Q8TDY4 903 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 TMEM79Q9BSE2 394 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 PI4K2AQ9BTU6 479 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 CCDC78A2IDD5 438 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 KCNJ2P63252 427 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 MXD4Q14582 209 aaPredicted RBP18.15■□□□□ 0.5
SPAST-202ENST00000345662 PATL1Q86TB9 770 aaKnown RBP18.15■□□□□ 0.5
SPAST-202ENST00000345662 V9GYQ6 96 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 DFFAO00273 331 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 GTF2H1P32780 548 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 CASP4P49662 377 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 TNIP2Q8NFZ5 429 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 PARD3BQ8TEW8 1205 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 PDCD6IPQ8WUM4 868 aaKnown RBP18.15■□□□□ 0.5
SPAST-202ENST00000345662 ACSF2Q96CM8 615 aaPredicted RBP18.15■□□□□ 0.5
SPAST-202ENST00000345662 TLR2O60603 784 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 ZNF23P17027 643 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 EP400NLQ6ZTU2 488 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 LDHDQ86WU2 507 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 APBB2Q92870 758 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 SIK2Q9H0K1 926 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 FLT1P17948 1338 aa18.15■□□□□ 0.5
SPAST-202ENST00000345662 CYP11B1P15538 503 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms