RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 RSL24D1Q9UHA3 163 aaKnown RBP20.13■□□□□ 0.81
HDAC4-201ENST00000345617 TMCC3Q9ULS5 477 aa20.13■□□□□ 0.81
HDAC4-201ENST00000345617 EIF3LQ9Y262 564 aaKnown RBP20.13■□□□□ 0.81
HDAC4-201ENST00000345617 STX11O75558 287 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 EAPPQ56P03 285 aaPredicted RBP20.12■□□□□ 0.81
HDAC4-201ENST00000345617 PDS5AQ29RF7 1337 aaKnown RBP20.12■□□□□ 0.81
HDAC4-201ENST00000345617 RGS20O76081 388 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 AKAP5P24588 427 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 ZNF507Q8TCN5 953 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 TMEM51Q9NW97 253 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 MAPK7Q13164 816 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 ATAD3BQ5T9A4 648 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 CATSPERBQ9H7T0 1116 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 UTYO14607 1347 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 PRIM2P49643 509 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 CEBPAP49715 358 aaPredicted RBP20.12■□□□□ 0.81
HDAC4-201ENST00000345617 SPATA2Q9UM82 520 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 ATXN2Q99700 1313 aaKnown RBP20.12■□□□□ 0.81
HDAC4-201ENST00000345617 ZIM3Q96PE6 472 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 ZFYVE1Q9HBF4 777 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 ZNF302Q9NR11 478 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 KCNT1Q5JUK3 1230 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 NYAP1Q6ZVC0 841 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 UNC45BQ8IWX7 931 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 MS4A14Q96JA4 679 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 RAD54BQ9Y620 910 aa20.12■□□□□ 0.81
HDAC4-201ENST00000345617 IL18RAPO95256 599 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 ALG13Q9NP73 1137 aaKnown RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 BSDC1Q9NW68 430 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 DKK3Q9UBP4 350 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 MAGI2Q86UL8 1455 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 MED14O60244 1454 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 CYP51A1Q16850 503 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 SHROOM1Q2M3G4 852 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 ANKMY2Q8IV38 441 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 C4orf33Q8N1A6 199 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 ZC3H13Q5T200 1668 aaKnown RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 RPS6P62753 249 aaKnown RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 POLR3FQ9H1D9 316 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 GHRP10912 638 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 TWF2Q6IBS0 349 aaKnown RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 NAPEPLDQ6IQ20 393 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 PIPSLA2A3N6 862 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 RAD51CO43502 376 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 PRKAG2Q9UGJ0 569 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 PGK2P07205 417 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 AP1S2P56377 157 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 RSBN1Q5VWQ0 802 aaPredicted RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 OSBP2Q969R2 916 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 DBR1Q9UK59 544 aaKnown RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 SARSP49591 514 aaKnown RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 SLC29A2Q14542 456 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 MOSPD2Q8NHP6 518 aa20.11■□□□□ 0.81
HDAC4-201ENST00000345617 AGO2Q9UKV8 859 aaKnown RBP20.11■□□□□ 0.81
HDAC4-201ENST00000345617 CBFA2T3O75081 653 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 HOXA13P31271 388 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-201ENST00000345617 BTKQ06187 659 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 MUTP22033 750 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 TMEM79Q9BSE2 394 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 VTA1Q9NP79 307 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 DMPKQ09013 629 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 PID1Q7Z2X4 250 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 SLC22A9Q8IVM8 553 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 SNRNP27Q8WVK2 155 aaKnown RBP20.1■□□□□ 0.81
HDAC4-201ENST00000345617 UBXN6Q9BZV1 441 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 TRIM9Q9C026 710 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 TUBA4AP68366 448 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 PRKCQQ04759 706 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 KYQ8NBH2 561 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 L2HGDHQ9H9P8 463 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 ZNF185O15231 689 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 GLRA3O75311 464 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 TSPAN9O75954 239 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 ECM2O94769 699 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-201ENST00000345617 ZNF746Q6NUN9 644 aaPredicted RBP20.1■□□□□ 0.81
HDAC4-201ENST00000345617 MYRFQ9Y2G1 1151 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 AHI1Q8N157 1196 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 KCNF1Q9H3M0 494 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 CD248Q9HCU0 757 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 C8orf4Q9NR00 106 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 KRT34O76011 436 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 UCHL3P15374 230 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 Q3C1V9 767 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 DLG3Q92796 817 aa20.1■□□□□ 0.81
HDAC4-201ENST00000345617 TCN1P20061 433 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 STIP1P31948 543 aaKnown RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 PRKAA2P54646 552 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 ULK2Q8IYT8 1036 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 SNX31Q8N9S9 440 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 PHTF1Q9UMS5 762 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 F8VZ95 297 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 P4HBP07237 508 aaKnown RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 C21orf59P57076 290 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 EFHC1Q5JVL4 640 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 CENPLQ8N0S6 344 aaPredicted RBP20.09■□□□□ 0.81
HDAC4-201ENST00000345617 VPS33AQ96AX1 596 aa20.09■□□□□ 0.81
HDAC4-201ENST00000345617 TTLL4Q14679 1199 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms