RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 PIAS1O75925 651 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 TPD52P55327 224 aaPredicted RBP16.27■□□□□ 0.19
PTPRU-201ENST00000345512 MROH9Q5TGP6 573 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 LLGL2Q6P1M3 1020 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 RSBN1LQ6PCB5 846 aaPredicted RBP16.27■□□□□ 0.19
PTPRU-201ENST00000345512 PRPF39Q86UA1 669 aaKnown RBP16.27■□□□□ 0.19
PTPRU-201ENST00000345512 TEKT4Q8WW24 435 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 ZNF75CPQ92670 426 aaPredicted RBP16.27■□□□□ 0.19
PTPRU-201ENST00000345512 PPWD1Q96BP3 646 aaKnown RBP16.27■□□□□ 0.19
PTPRU-201ENST00000345512 SERPINI1Q99574 410 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 ZC3H4Q9UPT8 1303 aaKnown RBP16.27■□□□□ 0.19
PTPRU-201ENST00000345512 ATXN7L3BQ96GX2 97 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 FAM167AQ96KS9 214 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 MTMR12Q9C0I1 747 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 RSAD1Q9HA92 442 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 SHOC2Q9UQ13 582 aa16.27■□□□□ 0.19
PTPRU-201ENST00000345512 CALB2P22676 271 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 DNAL1Q4LDG9 190 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 EMC1Q8N766 993 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 MAFGO15525 162 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 MX2P20592 715 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 BGNP21810 368 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 PTGIRP43119 386 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 GTF2BQ00403 316 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
PTPRU-201ENST00000345512 ORC1Q13415 861 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 DCAF12L1Q5VU92 463 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 ZDHHC24Q6UX98 284 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 MAP4K3Q8IVH8 894 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 SPIRE2Q8WWL2 714 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 ZBTB10Q96DT7 871 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 C10orf88Q9H8K7 445 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 PCDH9Q9HC56 1237 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 ZDHHC18Q9NUE0 388 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 HOXC10Q9NYD6 342 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 H0YGN5 161 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 ITGB5P18084 799 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 POLD1P28340 1107 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 FSCBQ5H9T9 825 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 MFSD5Q6N075 450 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 RDM1Q8NG50 284 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 GABPB2Q8TAK5 448 aaPredicted RBP16.26■□□□□ 0.19
PTPRU-201ENST00000345512 STK32AQ8WU08 396 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 SEMA4DQ92854 862 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 TMEM120AQ9BXJ8 343 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 KIAA1683Q9H0B3 1180 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 NFS1Q9Y697 457 aa16.26■□□□□ 0.19
PTPRU-201ENST00000345512 C5orf60A6NFR6 353 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 A8MUI8 341 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 SPAG6O75602 509 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 SERPINB4P48594 390 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 CDKL3Q8IVW4 592 aaPredicted RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 C2orf40Q9H1Z8 148 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 SNX25Q9H3E2 840 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 RNPEPL1Q9HAU8 725 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.25■□□□□ 0.196e-7■■■□□ 18.5
PTPRU-201ENST00000345512 PAK5Q9P286 719 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 EPS15L1Q9UBC2 864 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 IGKV6D-41A0A0C4DH26 115 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 F8VP50 259 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 CUL3Q13618 768 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 RPS6KA2Q15349 733 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 LRRC23Q53EV4 343 aaPredicted RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 TTC39BQ5VTQ0 682 aaPredicted RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 BZW1Q7L1Q6 419 aaKnown RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 TRIM56Q9BRZ2 755 aaKnown RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 R3HDM2Q9Y2K5 976 aaKnown RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 LOC100653049A0A140TA62 436 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 SMAPO00193 183 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 KRT34O76011 436 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 PYGBP11216 843 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 RNF43Q68DV7 783 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 CERKQ8TCT0 537 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 SHCBP1LQ9BZQ2 653 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 KLHL8Q9P2G9 620 aaPredicted RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 PFDN1O60925 122 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 NLRP11P59045 1033 aaKnown RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 DACT2Q5SW24 774 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 CPNE8Q86YQ8 564 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 FITM2Q8N6M3 262 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 UBA3Q8TBC4 463 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 TBC1D10AQ9BXI6 508 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 TEX13BQ9BXU2 312 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 LRRC4Q9HBW1 653 aa16.25■□□□□ 0.19
PTPRU-201ENST00000345512 SAE1Q9UBE0 346 aaPredicted RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.25■□□□□ 0.19
PTPRU-201ENST00000345512 KATNAL2Q8IYT4 538 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 GPRASP2Q96D09 838 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 FAM96AQ9H5X1 160 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 STARD13Q9Y3M8 1113 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 SNED1Q8TER0 1413 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 MGRN1O60291 552 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 STIP1P31948 543 aaKnown RBP16.24■□□□□ 0.19
PTPRU-201ENST00000345512 MYL6P60660 151 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 FAM47CQ5HY64 1035 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 CISHQ9NSE2 258 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
PTPRU-201ENST00000345512 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms