RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 CMASQ8NFW8 434 aaPredicted RBP22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 SPPL2BQ8TCT7 592 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 C2orf15Q8WU43 125 aaKnown RBP22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 TNIP3Q96KP6 325 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 SEPT5Q99719 369 aaPredicted RBP22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 CRACR2AQ9BSW2 395 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 PRKD2Q9BZL6 878 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 DPEP3Q9H4B8 488 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 TMLHEQ9NVH6 421 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 XYLBO75191 536 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 NDST1P52848 882 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 CYP27A1Q02318 531 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 MAPRE1Q15691 268 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 PPM1KQ8N3J5 372 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 FAXDC2Q96IV6 333 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 TAB2Q9NYJ8 693 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 NME7Q9Y5B8 376 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 VNN2O95498 520 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 IL9P15248 144 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 PTPN1P18031 435 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 HOXA9P31269 272 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 MTHFRP42898 656 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 ALDH1A3P47895 512 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 TWF1Q12792 350 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 CBX2Q14781 532 aaPredicted RBP22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 NCAPHQ15003 741 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 CCDC142Q17RM4 750 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 MDH1BQ5I0G3 518 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 GBP6Q6ZN66 633 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 C4orf50Q6ZRC1 276 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 ELMOD1Q8N336 334 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 B3GALNT2Q8NCR0 500 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 FEZF2Q8TBJ5 459 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 ARID3AQ99856 593 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 DNAI2Q9GZS0 605 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 INTS2Q9H0H0 1204 aaKnown RBP22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 VPS16Q9H269 839 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 CRISPLD1Q9H336 500 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 CRTAC1Q9NQ79 661 aa22.2■■□□□ 1.14
SMARCB1-202ENST00000344921 TBXAS1P24557 533 aaPredicted RBP22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 TUFMP49411 452 aaKnown RBP22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 ORC1Q13415 861 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 CUL2Q13617 745 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 EXOC3L4Q17RC7 722 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 FAM171BQ6P995 826 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 ACOT1Q86TX2 421 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 UNC93AQ86WB7 457 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 DHX40Q8IX18 779 aaKnown RBP22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 TTC9BQ8N6N2 239 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 LMO3Q8TAP4 145 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 MYCBPAPQ8TBZ2 947 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 ZNF707Q96C28 371 aaPredicted RBP22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 YIPF1Q9Y548 306 aa22.19■■□□□ 1.14
SMARCB1-202ENST00000344921 C5orf42Q9H799 3197 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 PLD1Q13393 1074 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 KRT31Q15323 416 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 SMAD2Q15796 467 aaKnown RBP22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 ZNF394Q53GI3 561 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 MIIPQ5JXC2 388 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 CYP26C1Q6V0L0 522 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 TTC39CQ8N584 583 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 MYLPFQ96A32 169 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 NECTIN4Q96NY8 510 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 PKMYT1Q99640 499 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 LPIN3Q9BQK8 851 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 NT5C1AQ9BXI3 368 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 CISHQ9NSE2 258 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 HSFX1Q9UBD0 423 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 HMGXB4Q9UGU5 601 aa22.18■■□□□ 1.14
SMARCB1-202ENST00000344921 SOAT2O75908 522 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 YWHAEP62258 255 aaKnown RBP22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 INCA1Q0VD86 236 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 RRAGAQ7L523 313 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 FAM200AQ8TCP9 573 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 SUSD6Q92537 303 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 PCED1BQ96HM7 432 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 ZNF512Q96ME7 567 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 GTPBP10A4D1E9 387 aaKnown RBP22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 CILPO75339 1184 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 CAVIN2O95810 425 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 SLC9A1P19634 815 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 CYP2F1P24903 491 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 EPHB3P54753 998 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 TJAP1Q5JTD0 557 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 IQCEQ6IPM2 695 aa22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 GRASPQ7Z6J2 395 aaPredicted RBP22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 FUBP3Q96I24 572 aaKnown RBP eCLIP22.17■■□□□ 1.14
SMARCB1-202ENST00000344921 C2orf16Q68DN1 1984 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 HAPLN1P10915 354 aaPredicted RBP22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 BMP1P13497 986 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 CFAP221Q4G0U5 840 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 TRIM65Q6PJ69 517 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 MED10Q9BTT4 135 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 RHOBTB2Q9BYZ6 727 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 POMKQ9H5K3 350 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 CBX8Q9HC52 389 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 ABCB6Q9NP58 842 aa22.16■■□□□ 1.14
SMARCB1-202ENST00000344921 ZNF18P17022 549 aa22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 BDNFP23560 247 aa22.15■■□□□ 1.14
SMARCB1-202ENST00000344921 TPM4P67936 248 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms