RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SPC24Q8NBT2 197 aa14.77□□□□□ -0.04
TPM4-202ENST00000344824 ST13P5Q8NFI4 369 aaPredicted RBP14.77□□□□□ -0.04
TPM4-202ENST00000344824 OR10T2Q8NGX3 314 aa14.77□□□□□ -0.04
TPM4-202ENST00000344824 ING5Q8WYH8 240 aa14.77□□□□□ -0.04
TPM4-202ENST00000344824 SLC35C1Q96A29 364 aa14.77□□□□□ -0.04
TPM4-202ENST00000344824 PCMTD1Q96MG8 357 aaPredicted RBP14.77□□□□□ -0.04
TPM4-202ENST00000344824 MYADMQ96S97 322 aa14.77□□□□□ -0.04
TPM4-202ENST00000344824 SIX4Q9UIU6 781 aa14.77□□□□□ -0.04
TPM4-202ENST00000344824 YIPF1Q9Y548 306 aa14.77□□□□□ -0.04
TPM4-202ENST00000344824 ZNF638Q14966 1978 aaKnown RBP14.77□□□□□ -0.05
TPM4-202ENST00000344824 MTMR11A4FU01 709 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 PHACTR2O75167 634 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 GCLMP48507 274 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 MTMR3Q13615 1198 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 TMC6Q7Z403 805 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 ZDHHC14Q8IZN3 488 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 LRRC52Q8N7C0 313 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 TMC2Q8TDI7 906 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 PARD3BQ8TEW8 1205 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 MRFAP1L1Q96HT8 127 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 CORO1BQ9BR76 489 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 DNMT3BQ9UBC3 853 aaKnown RBP14.76□□□□□ -0.05
TPM4-202ENST00000344824 L1RE1Q9UN81 338 aa14.76□□□□□ -0.05
TPM4-202ENST00000344824 CYP11A1P05108 521 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 ZXDAP98168 799 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 MYL7Q01449 175 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 TSPY1Q01534 308 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 PPP3CAQ08209 521 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 TRPC3Q13507 836 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 C1orf220Q5T0J3 134 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 TRAPPC11Q7Z392 1133 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 TCEAL8Q8IYN2 117 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 ADGRF2Q8IZF7 708 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 PDCL2Q8N4E4 241 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 ATAD1Q8NBU5 361 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 HPDLQ96IR7 371 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 SEPT5Q99719 369 aaPredicted RBP14.75□□□□□ -0.05
TPM4-202ENST00000344824 CRACR2AQ9BSW2 395 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 OXCT2Q9BYC2 517 aaPredicted RBP14.75□□□□□ -0.05
TPM4-202ENST00000344824 RHOBTB2Q9BYZ6 727 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 SMOC2Q9H3U7 446 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 SORCS3Q9UPU3 1222 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 SLC27A5Q9Y2P5 690 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 MRPS23Q9Y3D9 190 aaKnown RBP14.75□□□□□ -0.05
TPM4-202ENST00000344824 PTPRDP23468 1912 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 SOAT2O75908 522 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 RHOP08100 348 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 ACAT1P24752 427 aaKnown RBP14.75□□□□□ -0.05
TPM4-202ENST00000344824 FMO5P49326 533 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 KLK7P49862 253 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 DUSP4Q13115 394 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 GPR17Q13304 367 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 SYCP1Q15431 976 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 CBWD6Q4V339 395 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 CBWD3Q5JTY5 395 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 CBWD5Q5RIA9 395 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 IQCEQ6IPM2 695 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 TTC9BQ8N6N2 239 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 ITFG1Q8TB96 612 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 MMS19Q96T76 1030 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 LRFN3Q9BTN0 628 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 C11orf16Q9NQ32 467 aa14.75□□□□□ -0.05
TPM4-202ENST00000344824 DDX43Q9NXZ2 648 aaKnown RBP14.75□□□□□ -0.05
TPM4-202ENST00000344824 ABI2Q9NYB9 513 aaPredicted RBP14.75□□□□□ -0.05
TPM4-202ENST00000344824 OBSL1O75147 1896 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 STX10O60499 249 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 MYL4P12829 197 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 PTPN2P17706 415 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 ALDH1A3P47895 512 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 MXI1P50539 228 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 TNNC1P63316 161 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 PLD1Q13393 1074 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 MGAT5BQ3V5L5 792 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 SCARA5Q6ZMJ2 495 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 PDZD4Q76G19 769 aaPredicted RBP14.74□□□□□ -0.05
TPM4-202ENST00000344824 VSTM4Q8IW00 320 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 DCP1BQ8IZD4 617 aaKnown RBP14.74□□□□□ -0.05
TPM4-202ENST00000344824 CXorf38Q8TB03 319 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 RSAD2Q8WXG1 361 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 EDAQ92838 391 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 ZNF512Q96ME7 567 aaPredicted RBP14.74□□□□□ -0.05
TPM4-202ENST00000344824 RTP3Q9BQQ7 232 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 ZCWPW1Q9H0M4 648 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 CRISPLD1Q9H336 500 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 KCNK12Q9HB15 430 aa14.74□□□□□ -0.05
TPM4-202ENST00000344824 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.74□□□□□ -0.052e-6■■■■■ 205.4
TPM4-202ENST00000344824 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.74□□□□□ -0.057e-8■■■■□ 22.9
TPM4-202ENST00000344824 DENND4CQ5VZ89 1909 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 ZDBF2Q9HCK1 2354 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 HCRTO43612 131 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 VNN2O95498 520 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 POU2F2P09086 479 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 CEBPBP17676 345 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 CDC25BP30305 580 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 SLC5A9Q2M3M2 681 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 TRIM67Q6ZTA4 783 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 RTL10Q7L3V2 364 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.73□□□□□ -0.05
TPM4-202ENST00000344824 OSTM1Q86WC4 334 aa14.73□□□□□ -0.05
TPM4-202ENST00000344824 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms