RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 EMC1Q8N766 993 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 ANKRD36BP1Q96IX9 119 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 SAMD15Q9P1V8 674 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 LGALS13Q9UHV8 139 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 GPR25O00155 361 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 GAS2O43903 313 aaKnown RBP22.57■■□□□ 1.2
CCDC38-201ENST00000344280 PSMA2P25787 234 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 GCAP28676 217 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 VCPP55072 806 aaKnown RBP22.57■■□□□ 1.2
CCDC38-201ENST00000344280 SLC25A11Q02978 314 aaKnown RBP22.57■■□□□ 1.2
CCDC38-201ENST00000344280 SURF1Q15526 300 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 WDR78Q5VTH9 848 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 CAPN12Q6ZSI9 719 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 NIPA2Q8N8Q9 360 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 C1orf127Q8N9H9 656 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 CPXM1Q96SM3 734 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 KDM4CQ9H3R0 1056 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 SLC40A1Q9NP59 571 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 PPME1Q9Y570 386 aa22.57■■□□□ 1.2
CCDC38-201ENST00000344280 CDH16O75309 829 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 LRCH4O75427 683 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 RASSF9O75901 435 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 IFNB1P01574 187 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 ATP5DP30049 168 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 RAD23BP54727 409 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 IGBP1P78318 339 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 PLCB3Q01970 1234 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 LMNB2Q03252 620 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 GJC2Q5T442 439 aaPredicted RBP22.56■■□□□ 1.2
CCDC38-201ENST00000344280 ANKS4BQ8N8V4 417 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 SMYD3Q9H7B4 428 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 CEP83Q9Y592 693 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 KRT3P12035 628 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 HAUS2Q9NVX0 235 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 GGT7Q9UJ14 662 aa22.56■■□□□ 1.2
CCDC38-201ENST00000344280 TPX2Q9ULW0 747 aaKnown RBP22.56■■□□□ 1.2
CCDC38-201ENST00000344280 DNAJC25-GNG10A0A024R161 153 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 SNX3O60493 162 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 BANF1O75531 89 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 CD48P09326 243 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 TXNP10599 105 aaKnown RBP22.55■■□□□ 1.2
CCDC38-201ENST00000344280 GDF10P55107 478 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 COPS2P61201 443 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 GAD2Q05329 585 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 ITIH4Q14624 930 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 STAT4Q14765 748 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 TMED2Q15363 201 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 SULF1Q8IWU6 871 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 EFCC1Q9HA90 598 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 IFT122Q9HBG6 1241 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 ERBB2P04626 1255 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 PTPN7P35236 360 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 PSMC1P62191 440 aaKnown RBP22.55■■□□□ 1.2
CCDC38-201ENST00000344280 TAP1Q03518 808 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 RNASEH2BQ5TBB1 312 aaKnown RBP22.55■■□□□ 1.2
CCDC38-201ENST00000344280 MMP19Q99542 508 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 BCO2Q9BYV7 579 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 RPF1Q9H9Y2 349 aaKnown RBP22.55■■□□□ 1.2
CCDC38-201ENST00000344280 ABCF3Q9NUQ8 709 aa22.55■■□□□ 1.2
CCDC38-201ENST00000344280 DRG1Q9Y295 367 aaKnown RBP22.55■■□□□ 1.2
CCDC38-201ENST00000344280 SIGLEC16A6NMB1 481 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 LACTBL1A8MY62 500 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 GOLGA8MH3BSY2 632 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 SGK1O00141 431 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 NUGGCQ68CJ6 796 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 SLC35B2Q8TB61 432 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 CKAP2Q8WWK9 683 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 MAML1Q92585 1016 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 NKD2Q969F2 451 aaPredicted RBP22.54■■□□□ 1.2
CCDC38-201ENST00000344280 DCPSQ96C86 337 aaKnown RBP22.54■■□□□ 1.2
CCDC38-201ENST00000344280 DDX56Q9NY93 547 aaKnown RBP22.54■■□□□ 1.2
CCDC38-201ENST00000344280 SLC25A27O95847 323 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 OAS1P00973 400 aaKnown RBP22.54■■□□□ 1.2
CCDC38-201ENST00000344280 ITGB3P05106 788 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 YWHAEP62258 255 aaKnown RBP22.54■■□□□ 1.2
CCDC38-201ENST00000344280 KCTD2Q14681 263 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 TAF5Q15542 800 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 ZNF667Q5HYK9 610 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 JADE1Q6IE81 842 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 SLC4A11Q8NBS3 891 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 CXorf38Q8TB03 319 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 CCHCR1Q8TD31 782 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 METTL5Q9NRN9 209 aaKnown RBP22.54■■□□□ 1.2
CCDC38-201ENST00000344280 STRIP2Q9ULQ0 834 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 TNFSF13BQ9Y275 285 aa22.54■■□□□ 1.2
CCDC38-201ENST00000344280 EXOC1LA0A1B0GW35 172 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 RASA4BC9J798 803 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 RASA4O43374 803 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 ITGAVP06756 1048 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 ABHD2P08910 425 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 OTUD4Q01804 1114 aaKnown RBP22.53■■□□□ 1.2
CCDC38-201ENST00000344280 TFDP1Q14186 410 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 ZKSCAN8Q15776 578 aaPredicted RBP22.53■■□□□ 1.2
CCDC38-201ENST00000344280 CCDC142Q17RM4 750 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 XYLT1Q86Y38 959 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 SUGP1Q8IWZ8 645 aaKnown RBP22.53■■□□□ 1.2
CCDC38-201ENST00000344280 TAB3Q8N5C8 712 aaPredicted RBP22.53■■□□□ 1.2
CCDC38-201ENST00000344280 ACTL9Q8TC94 416 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 CPB2Q96IY4 423 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 ADAM33Q9BZ11 813 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms