RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 MED10Q9BTT4 135 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 HIBADHP31937 336 aaKnown RBP14.18□□□□□ -0.14
TRIO-202ENST00000344204 ALDH1A3P47895 512 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 MTA1Q13330 715 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 TBC1D10CQ8IV04 446 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 CACNA2D2Q9NY47 1150 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 CCDC59Q9P031 241 aaKnown RBP14.18□□□□□ -0.14
TRIO-202ENST00000344204 RABL2AQ9UBK7 228 aaPredicted RBP14.18□□□□□ -0.14
TRIO-202ENST00000344204 RBBP7Q16576 425 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 DIS3LQ8TF46 1054 aaKnown RBP14.18□□□□□ -0.14
TRIO-202ENST00000344204 ATXN7L3BQ96GX2 97 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 KLF6Q99612 283 aaPredicted RBP14.18□□□□□ -0.14
TRIO-202ENST00000344204 SLC24A2Q9UI40 661 aa14.18□□□□□ -0.14
TRIO-202ENST00000344204 EME2A4GXA9 379 aaPredicted RBP14.17□□□□□ -0.14
TRIO-202ENST00000344204 POTEMA6NI47 508 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 RIPK2O43353 540 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 PLIN5Q00G26 463 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 FBXO25Q8TCJ0 367 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 CLOCKO15516 846 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 FBXO31Q5XUX0 539 aaPredicted RBP14.17□□□□□ -0.14
TRIO-202ENST00000344204 IFNEQ86WN2 208 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 HPS3Q969F9 1004 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 TEKT3Q9BXF9 490 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 RHOBTB3O94955 611 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 WEE2P0C1S8 567 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 EIF3EP60228 445 aaKnown RBP14.17□□□□□ -0.14
TRIO-202ENST00000344204 POU5F1BQ06416 359 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 C17orf80Q9BSJ5 609 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 EPB41L4AQ9HCS5 686 aaPredicted RBP14.17□□□□□ -0.14
TRIO-202ENST00000344204 APOL1O14791 398 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 POLD3Q15054 466 aaPredicted RBP14.17□□□□□ -0.14
TRIO-202ENST00000344204 DDX50Q9BQ39 737 aaKnown RBP14.17□□□□□ -0.14
TRIO-202ENST00000344204 SENP7Q9BQF6 1050 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 PACSIN1Q9BY11 444 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 CENPXA8MT69 81 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 BIRC5O15392 142 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 CDKL3Q8IVW4 592 aaPredicted RBP14.17□□□□□ -0.14
TRIO-202ENST00000344204 NOTOA8MTQ0 251 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 CDK16Q00536 496 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 SPATA16Q9BXB7 569 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 ILKAPQ9H0C8 392 aaPredicted RBP14.17□□□□□ -0.14
TRIO-202ENST00000344204 IST1P53990 364 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 LIN52Q52LA3 116 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 STOX1Q6ZVD7 989 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 CYB5R4Q7L1T6 521 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 PPIL6Q8IXY8 311 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 PCDH12Q9NPG4 1184 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 SNTNA6NMZ2 147 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 GCLMP48507 274 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 ADAM17P78536 824 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 CKAP2Q8WWK9 683 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 DLG3Q92796 817 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 SEL1LQ9UBV2 794 aa14.17□□□□□ -0.14
TRIO-202ENST00000344204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.16□□□□□ -0.14
TRIO-202ENST00000344204 NPEPPSP55786 919 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 LRRC8DQ7L1W4 858 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 SLC13A5Q86YT5 568 aaPredicted RBP14.16□□□□□ -0.14
TRIO-202ENST00000344204 C11orf70Q9BRQ4 267 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 TMEM247A6NEH6 219 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 TRIM13O60858 407 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 MSL3P1P0C860 447 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 TP53BP2Q13625 1128 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 ZBTB8OSQ8IWT0 167 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 SPRTNQ9H040 489 aaPredicted RBP14.16□□□□□ -0.14
TRIO-202ENST00000344204 SPTBP11277 2137 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 C9orf16Q9BUW7 83 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 MLPHQ9BV36 600 aaPredicted RBP14.16□□□□□ -0.14
TRIO-202ENST00000344204 MOV10Q9HCE1 1003 aaKnown RBP14.16□□□□□ -0.14
TRIO-202ENST00000344204 PREBQ9HCU5 417 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 KLHL11Q9NVR0 708 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 ASNSD1Q9NWL6 643 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 APEX2Q9UBZ4 518 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 PHKA1P46020 1223 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 ULK2Q8IYT8 1036 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 NDUFAF2Q8N183 169 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 ZSCAN9O15535 394 aaPredicted RBP14.16□□□□□ -0.14
TRIO-202ENST00000344204 NCCRP1Q6ZVX7 275 aaPredicted RBP14.16□□□□□ -0.14
TRIO-202ENST00000344204 RORBQ92753 470 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 PAGR1Q9BTK6 254 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 THAP1Q9NVV9 213 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 FAM69CQ0P6D2 419 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 KRT27Q7Z3Y8 459 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 SH3TC2Q8TF17 1288 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 SEMA4AQ9H3S1 761 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 ABCB11O95342 1321 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 APRTP07741 180 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 TMEM253P0C7T8 217 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 ATAD3BQ5T9A4 648 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 APBB2Q92870 758 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 TLR10Q9BXR5 811 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
TRIO-202ENST00000344204 CDK7P50613 346 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 KCNQ4P56696 695 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 WNK4Q96J92 1243 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 KMT5AQ9NQR1 393 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 ARMCX1Q9P291 453 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 GRID1Q9ULK0 1009 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 BGNP21810 368 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 PPP4R4Q6NUP7 873 aa14.16□□□□□ -0.14
TRIO-202ENST00000344204 NLRX1Q86UT6 975 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms