RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 IRAK1P51617 712 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 NDST1P52848 882 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 FCGRTP55899 365 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 MTMR3Q13615 1198 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 SIX1Q15475 284 aaPredicted RBP19.67■□□□□ 0.74
HOXA9-201ENST00000343483 GNASQ5JWF2 1037 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 FOXR1Q6PIV2 292 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 CCDC105Q8IYK2 499 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 C3orf20Q8ND61 904 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 TJP2Q9UDY2 1190 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 PCYOX1Q9UHG3 505 aa19.67■□□□□ 0.74
HOXA9-201ENST00000343483 BARX2Q9UMQ3 279 aaPredicted RBP19.67■□□□□ 0.74
HOXA9-201ENST00000343483 GOLGA6L10A6NI86 522 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 M0QYV0 167 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 PPEF2O14830 753 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 FSCN2O14926 492 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 MICAL2O94851 1124 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 STAU1O95793 577 aaKnown RBP19.66■□□□□ 0.74
HOXA9-201ENST00000343483 AXLP30530 894 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 GNGT1P63211 74 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 SKOR1P84550 965 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 CYP1B1Q16678 543 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 UBLCP1Q8WVY7 318 aaPredicted RBP19.66■□□□□ 0.74
HOXA9-201ENST00000343483 PTPN22Q9Y2R2 807 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 COILP38432 576 aaPredicted RBP19.66■□□□□ 0.74
HOXA9-201ENST00000343483 PTGIRP43119 386 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 CRYBB1P53674 252 aaPredicted RBP19.66■□□□□ 0.74
HOXA9-201ENST00000343483 TAP1Q03518 808 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 ZNF252P-AS1Q0IIN9 211 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 INCA1Q0VD86 236 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 SGO2Q562F6 1265 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 ZFYVE27Q5T4F4 411 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 DUPD1Q68J44 220 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 TMC3Q7Z5M5 1100 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 BEST2Q8NFU1 509 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 C1orf54Q8WWF1 131 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 TRIB2Q92519 343 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 ATP6V1G3Q96LB4 118 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 CPXM1Q96SM3 734 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 KLHL11Q9NVR0 708 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 GABRQQ9UN88 632 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.66■□□□□ 0.74
HOXA9-201ENST00000343483 SNX9Q9Y5X1 595 aa19.66■□□□□ 0.74
HOXA9-201ENST00000343483 F8VP50 259 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 PGK1P00558 417 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 KCNJ1P48048 391 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 PSMC1P62191 440 aaKnown RBP19.65■□□□□ 0.74
HOXA9-201ENST00000343483 OGDHQ02218 1023 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 PPP1R15BQ5SWA1 713 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 MFSD14CQ5VZR4 134 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 KATNAL2Q8IYT4 538 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 HERPUD2Q9BSE4 406 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 HEMGNQ9BXL5 484 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 KLK14Q9P0G3 267 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 CNTN3Q9P232 1028 aa19.65■□□□□ 0.74
HOXA9-201ENST00000343483 HMGB1P1B2RPK0 211 aaPredicted RBP19.64■□□□□ 0.74
HOXA9-201ENST00000343483 H0YGN5 161 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 RALAP11233 206 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 VDRP11473 427 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 CYBAP13498 195 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 TCF4P15884 667 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 DHX9Q08211 1270 aaKnown RBP19.64■□□□□ 0.74
HOXA9-201ENST00000343483 TTC19Q6DKK2 380 aaPredicted RBP19.64■□□□□ 0.74
HOXA9-201ENST00000343483 CXCL17Q6UXB2 119 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 NME8Q8N427 588 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 OR2W6PQ8NHA6 318 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 FMO2Q99518 471 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 NT5C1AQ9BXI3 368 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 TMBIM4Q9HC24 238 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 PARP2Q9UGN5 583 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 SNX24Q9Y343 169 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 NFS1Q9Y697 457 aa19.64■□□□□ 0.74
HOXA9-201ENST00000343483 HMGCRP04035 888 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 MYZAPP0CAP1 466 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 KRT3P12035 628 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 HOXC8P31273 242 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 FNTAP49354 379 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 FLT3LGP49771 235 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 ATP1A2P50993 1020 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 SNX1Q13596 522 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 ZBTB6Q15916 424 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 ALKAL1Q6UXT8 129 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 KDM7AQ6ZMT4 941 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 TTC39CQ8N584 583 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 C12orf50Q8NA57 414 aaPredicted RBP19.64■□□□□ 0.73
HOXA9-201ENST00000343483 UBA3Q8TBC4 463 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 RUNDC3BQ96NL0 473 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 CFHR5Q9BXR6 569 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 LCMT1Q9UIC8 334 aa19.64■□□□□ 0.73
HOXA9-201ENST00000343483 A6NNZ2 444 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 PODXLO00592 558 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 EIF3HO15372 352 aaKnown RBP eCLIP19.63■□□□□ 0.73
HOXA9-201ENST00000343483 ERBB2P04626 1255 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 ZNF844Q08AG5 666 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 PIGHQ14442 188 aaPredicted RBP19.63■□□□□ 0.73
HOXA9-201ENST00000343483 CNGA2Q16280 664 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 TUBB8Q3ZCM7 444 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 MAIP1Q8WWC4 291 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 ATG4AQ8WYN0 398 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 MTG1Q9BT17 334 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms