RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 FMO5P49326 533 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 TPD52L1Q16890 204 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-201ENST00000340074 MGAT5BQ3V5L5 792 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 FAM171BQ6P995 826 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 SASS6Q6UVJ0 657 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 IRF2BP1Q8IU81 584 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 CREBRFQ8IUR6 639 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 TRIM59Q8IWR1 403 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 ELMOD1Q8N336 334 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 CNOT6LQ96LI5 555 aaKnown RBP16.29■□□□□ 0.2
UBE3B-201ENST00000340074 SEPT5Q99719 369 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-201ENST00000340074 BCO2Q9BYV7 579 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 DPEP3Q9H4B8 488 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 CRTAC1Q9NQ79 661 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 CEP72Q9P209 647 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 COQ4Q9Y3A0 265 aa16.29■□□□□ 0.2
UBE3B-201ENST00000340074 A8MXQ7 604 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 C2CD4DB7Z1M9 353 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 PTPN2P17706 415 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 TUFMP49411 452 aaKnown RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 PLD1Q13393 1074 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 PABPC1LQ4VXU2 614 aaKnown RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 CT47A1Q5JQC4 288 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 CAVIN1Q6NZI2 390 aaKnown RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 GET4Q7L5D6 327 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 LPIN3Q9BQK8 851 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 USTQ9Y2C2 406 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 DLL1O00548 723 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 N4BP1O75113 896 aaKnown RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 RHOP08100 348 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 HAPLN1P10915 354 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 ATF6P18850 670 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 FSHRP23945 695 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 CYP2F1P24903 491 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 EPHB3P54753 998 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 KCNH2Q12809 1159 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 MDH1BQ5I0G3 518 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 WDR44Q5JSH3 913 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 IQCEQ6IPM2 695 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 OTOP3Q7RTS5 596 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 SPATA2LQ8IUW3 424 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 TDRD5Q8NAT2 981 aaKnown RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 MYCBPAPQ8TBZ2 947 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 TATDN2Q93075 761 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 MYLPFQ96A32 169 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 ZNF512Q96ME7 567 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-201ENST00000340074 CORO1BQ9BR76 489 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 DNAJC25Q9H1X3 360 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 THAP9Q9H5L6 903 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 ANO10Q9NW15 660 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 HMGXB4Q9UGU5 601 aa16.28■□□□□ 0.2
UBE3B-201ENST00000340074 AFPP02771 609 aaKnown RBP16.27■□□□□ 0.19
UBE3B-201ENST00000340074 PTPN1P18031 435 aaKnown RBP16.27■□□□□ 0.19
UBE3B-201ENST00000340074 CYP27A1Q02318 531 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 MAPRE1Q15691 268 aaKnown RBP16.27■□□□□ 0.19
UBE3B-201ENST00000340074 STX1AQ16623 288 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 C4orf50Q6ZRC1 276 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 HS6ST3Q8IZP7 471 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 B3GALNT2Q8NCR0 500 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 ITFG1Q8TB96 612 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 ACSF2Q96CM8 615 aaPredicted RBP16.27■□□□□ 0.19
UBE3B-201ENST00000340074 PCED1BQ96HM7 432 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 MYADMQ96S97 322 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 CYP3A43Q9HB55 503 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 ABCB6Q9NP58 842 aa16.27■□□□□ 0.19
UBE3B-201ENST00000340074 MAGEC2Q9UBF1 373 aaPredicted RBP16.27■□□□□ 0.19
UBE3B-201ENST00000340074 ANAPC1Q9H1A4 1944 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 CUL9Q8IWT3 2517 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 TNFRSF10AO00220 468 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 PMM2O15305 246 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 CD58P19256 250 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 GBP2P32456 591 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-201ENST00000340074 GPR15P49685 360 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 NDST1P52848 882 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 ORC1Q13415 861 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 SLC5A9Q2M3M2 681 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 KLHL40Q2TBA0 621 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 CFAP221Q4G0U5 840 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 HSP90AA4PQ58FG1 418 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 C11orf57Q6ZUT1 292 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-201ENST00000340074 ACOT1Q86TX2 421 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 RNF135Q8IUD6 432 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 FAM200AQ8TCP9 573 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 GPR152Q8TDT2 470 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 GIPC2Q8TF65 315 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 PSMG2Q969U7 264 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 FUBP3Q96I24 572 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBE3B-201ENST00000340074 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
UBE3B-201ENST00000340074 AVENQ9NQS1 362 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-201ENST00000340074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBE3B-201ENST00000340074 MRPS23Q9Y3D9 190 aaKnown RBP16.26■□□□□ 0.19
UBE3B-201ENST00000340074 P4HA2O15460 535 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 PTMSP20962 102 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 BDNFP23560 247 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 CCR2P41597 374 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 MTIF2P46199 727 aaKnown RBP16.25■□□□□ 0.19
UBE3B-201ENST00000340074 INCA1Q0VD86 236 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 CETN1Q12798 172 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms