RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SNX30Q5VWJ9 437 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 RINLQ6ZS11 566 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 SYDE1Q6ZW31 735 aaPredicted RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 RFX6Q8HWS3 928 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 FBXO27Q8NI29 283 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 DENND1AQ8TEH3 1009 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 CNKSR1Q969H4 720 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 VTI1AQ96AJ9 217 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 IQCGQ9H095 443 aaKnown RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 TTLL13PA6NNM8 815 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 H3BRJ5 948 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 TOP3BO95985 862 aaKnown RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 MAPTP10636 758 aaKnown RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 PSMA2P25787 234 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 TFAMQ00059 246 aaKnown RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 MYBPC2Q14324 1141 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 GPAT2Q6NUI2 795 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 EEPD1Q7L9B9 569 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 EXD1Q8NHP7 514 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 CLEC4DQ8WXI8 215 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 SLCO2A1Q92959 643 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 TSC22D3Q99576 134 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 XPO7Q9UIA9 1087 aaKnown RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 ZNF536O15090 1300 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 CLUHO75153 1309 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 MYL2P10916 166 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 GEMIN4P57678 1058 aaKnown RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 ZCCHC23Q6ZST2 131 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 TAS1R3Q7RTX0 852 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 CCDC60Q8IWA6 550 aaPredicted RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 UNC45BQ8IWX7 931 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 PPM1NQ8N819 430 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 SCG3Q8WXD2 468 aaKnown RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 PARVAQ9NVD7 372 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 WNK3Q9BYP7 1800 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 PSTPIP1O43586 416 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 GNAZP19086 355 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 PRKCEQ02156 737 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 ZNF252P-AS1Q0IIN9 211 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 TRAF1Q13077 416 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 ACSBG2Q5FVE4 666 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 IGDCC3Q8IVU1 814 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 KATNAL2Q8IYT4 538 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 ALLCQ8N6M5 410 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 MFSD14AQ96MC6 490 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 TRIM55Q9BYV6 548 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 MTMR12Q9C0I1 747 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 ZNF277Q9NRM2 450 aaPredicted RBP16.94■□□□□ 0.3
SCARB1-202ENST00000339570 PIH1D1Q9NWS0 290 aaKnown RBP16.94■□□□□ 0.3
SCARB1-202ENST00000339570 PPARGC1AQ9UBK2 798 aaKnown RBP16.94■□□□□ 0.3
SCARB1-202ENST00000339570 MEI4A8MW99 385 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 H0YIN7 160 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 USP1O94782 785 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 ICAM1P05362 532 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 FAAP100Q0VG06 881 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 MMRN1Q13201 1228 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 EFCAB3Q8N7B9 438 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 DEPTORQ8TB45 409 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
SCARB1-202ENST00000339570 RILPQ96NA2 401 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 ACAP3Q96P50 834 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 HAPLN2Q9GZV7 340 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 COQ4Q9Y3A0 265 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 PCDHA10Q9Y5I2 948 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 CENPFP49454 3210 aa16.94■□□□□ 0.3
SCARB1-202ENST00000339570 K7ERI5 159 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 CYB561D2O14569 222 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 PPP1R12AO14974 1030 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-202ENST00000339570 LUC7L3O95232 432 aaKnown RBP16.93■□□□□ 0.3
SCARB1-202ENST00000339570 PTPN4P29074 926 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 GCNT1Q02742 428 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 NCOA4Q13772 614 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 C1orf228Q6PIY5 440 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 CFAP61Q8NHU2 1237 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 JOSD2Q8TAC2 188 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 TEKT4Q8WW24 435 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 XPNPEP1Q9NQW7 623 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 KANSL3Q9P2N6 904 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 FEM1BQ9UK73 627 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 AMPD1P23109 780 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 RFC1P35251 1148 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-202ENST00000339570 MYL6P60660 151 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 RAB6CQ53S08 254 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 IMPG2Q9BZV3 1241 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 RAB6CQ9H0N0 254 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 TBC1D22BQ9NU19 505 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 SMG5Q9UPR3 1016 aaKnown RBP16.93■□□□□ 0.3
SCARB1-202ENST00000339570 E5RJQ4 531 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 ENTPD3O75355 529 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 TMEM63AO94886 807 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 ALDH18A1P54886 795 aaKnown RBP16.93■□□□□ 0.3
SCARB1-202ENST00000339570 VCPP55072 806 aaKnown RBP16.93■□□□□ 0.3
SCARB1-202ENST00000339570 KLC1Q07866 573 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 PTK7Q13308 1070 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 KBTBD12Q3ZCT8 623 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 RNASEH2BQ5TBB1 312 aaKnown RBP16.93■□□□□ 0.3
SCARB1-202ENST00000339570 CCDC62Q6P9F0 684 aa16.93■□□□□ 0.3
SCARB1-202ENST00000339570 C4orf19Q8IY42 314 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms