RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 RNF168Q8IYW5 571 aaPredicted RBP15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 TMEM35BQ8NCS4 154 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 HESX1Q9UBX0 185 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 NME7Q9Y5B8 376 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 PCDHA13Q9Y5I0 950 aa15.43■□□□□ 0.06
NIPAL3-202ENST00000339255 OR6C75A6NL08 312 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 NT5C1B-RDH14C9J2C7 533 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 H7C4K7 107 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 ZNF263O14978 683 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 RTN2O75298 545 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 CYP1A1P04798 512 aaPredicted RBP15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 CDH5P33151 784 aaPredicted RBP15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 VAV2P52735 878 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 CENPCQ03188 943 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 USP41Q3LFD5 358 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 INTS6LQ5JSJ4 861 aaKnown RBP15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 VARS2Q5ST30 1063 aaKnown RBP15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 ZNF662Q6ZS27 426 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 KIAA1328Q86T90 577 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 GPR65Q8IYL9 337 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 ACRBPQ8NEB7 543 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 MYCBPAPQ8TBZ2 947 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 BCL7CQ8WUZ0 217 aaPredicted RBP15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 CYFIP2Q96F07 1278 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 ZSWIM1Q9BR11 485 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 UBE2OQ9C0C9 1292 aaKnown RBP15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 ISCUQ9H1K1 167 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 DPEP3Q9H4B8 488 aa15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.42■□□□□ 0.06
NIPAL3-202ENST00000339255 CALCAP01258 141 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 MAGEA1P43355 309 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 NSFP46459 744 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 SLC8A3P57103 927 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 NOMO3P69849 1222 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 KRT17Q04695 432 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 MRPL58Q14197 206 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 SHHQ15465 462 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 C9orf50Q5SZB4 431 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 DDX53Q86TM3 631 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PALB2Q86YC2 1186 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 CCAR2Q8N163 923 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 C12orf29Q8N999 325 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 MSANTD4Q8NCY6 345 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 TRIM11Q96F44 468 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 NOX5Q96PH1 765 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PCDHB18PQ96TA0 734 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 HNRNPABQ99729 332 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 GDF15Q99988 308 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 RTP3Q9BQQ7 232 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PLVAPQ9BX97 442 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 TSGA10Q9BZW7 698 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 FAM49BQ9NUQ9 324 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 TSPAN16Q9UKR8 245 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 REXO2Q9Y3B8 237 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PLXNA4Q9HCM2 1894 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 M0QYV0 167 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 SOD2P04179 222 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 H2AFZP0C0S5 128 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 LINC00271P0C7V0 271 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 SETSIPP0DME0 302 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 UNGP13051 313 aaPredicted RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 ACAT1P24752 427 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 BCAT1P54687 386 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PSMC1P62191 440 aaKnown RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PLCB3Q01970 1234 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PPP1R26Q5T8A7 1209 aaPredicted RBP15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 H2AFVQ71UI9 128 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 CEP57Q86XR8 500 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 VCPIP1Q96JH7 1222 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 HERC2P3Q9BVR0 1158 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 CRTAC1Q9NQ79 661 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PCDHA11Q9Y5I1 949 aa15.41■□□□□ 0.06
NIPAL3-202ENST00000339255 PATJQ8NI35 1801 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 HCRTO43612 131 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 KRT86O43790 486 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 MICAL2O94851 1124 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 FTLP02792 175 aaPredicted RBP15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 MYBL1P10243 752 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 GLUD2P49448 558 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 CREMQ03060 361 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 SMARCB1Q12824 385 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 NFE2Q16621 373 aaPredicted RBP15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 GOLGA7BQ2TAP0 167 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 CTXN3Q4LDR2 81 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 ARHGAP29Q52LW3 1261 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 MDH1BQ5I0G3 518 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 NAA35Q5VZE5 725 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 ACAD10Q6JQN1 1059 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 FAM171BQ6P995 826 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 C4orf50Q6ZRC1 276 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 PHF13Q86YI8 300 aaPredicted RBP15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 PASD1Q8IV76 773 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 DCP1BQ8IZD4 617 aaKnown RBP15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 ANKRD52Q8NB46 1076 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 OR10T2Q8NGX3 314 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 PIK3R5Q8WYR1 880 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 CHST7Q9NS84 486 aa15.4■□□□□ 0.06
NIPAL3-202ENST00000339255 ANKRD62A6NC57 917 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms