RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 WSCD1Q658N2 575 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 RNF43Q68DV7 783 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
CSMD2-202ENST00000338325 LRRTM3Q86VH5 581 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 DCP1BQ8IZD4 617 aaKnown RBP12.41□□□□□ -0.42
CSMD2-202ENST00000338325 EXOC4Q96A65 974 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 HHIPQ96QV1 700 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 CCSER1Q9C0I3 900 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 PARVGQ9HBI0 331 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 DPP3Q9NY33 737 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 PCDHB5Q9Y5E4 795 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 LAMA1P25391 3075 aa12.41□□□□□ -0.42
CSMD2-202ENST00000338325 TRAK2O60296 914 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 SEC24BO95487 1268 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 ACOT2P49753 483 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 ZNF268Q14587 947 aaPredicted RBP12.4□□□□□ -0.42
CSMD2-202ENST00000338325 PDGFRLQ15198 375 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 ELF2Q15723 593 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 FBXO43Q4G163 708 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
CSMD2-202ENST00000338325 MCTP1Q6DN14 999 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 TCEAL6Q6IPX3 200 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 CPA6Q8N4T0 437 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 RIN3Q8TB24 985 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 MRPS31Q92665 395 aaKnown RBP12.4□□□□□ -0.42
CSMD2-202ENST00000338325 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 P2RY13Q9BPV8 354 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 DUSP15Q9H1R2 295 aaPredicted RBP12.4□□□□□ -0.42
CSMD2-202ENST00000338325 POLR3BQ9NW08 1133 aaPredicted RBP12.4□□□□□ -0.42
CSMD2-202ENST00000338325 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
CSMD2-202ENST00000338325 ANKRD63C9JTQ0 380 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 RHOBTB1O94844 696 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 APBB3O95704 486 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 CSH1P0DML2 217 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 CSH2P0DML3 217 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 GALK1P51570 392 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 GTF2BQ00403 316 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 TSPY1Q01534 308 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 DHX8Q14562 1220 aaKnown RBP12.39□□□□□ -0.43
CSMD2-202ENST00000338325 SV2CQ496J9 727 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 TXNDC8Q6A555 127 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 ADALQ6DHV7 355 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 PSAPL1Q6NUJ1 521 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 SYT13Q7L8C5 426 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 MON1AQ86VX9 555 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 RPLP0P6Q8NHW5 317 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 LRRC15Q8TF66 581 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 ACDQ96AP0 544 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 AK8Q96MA6 479 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 ZNF560Q96MR9 790 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 FIZ1Q96SL8 496 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 EDEM2Q9BV94 578 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 ZHX3Q9H4I2 956 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 FBRSL1Q9HCM7 1045 aaKnown RBP12.39□□□□□ -0.43
CSMD2-202ENST00000338325 MAGED2Q9UNF1 606 aaPredicted RBP12.39□□□□□ -0.43
CSMD2-202ENST00000338325 THADAQ6YHU6 1953 aa12.39□□□□□ -0.43
CSMD2-202ENST00000338325 FRYQ5TBA9 3013 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 KPNA7A9QM74 516 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 TBCAO75347 108 aaKnown RBP12.38□□□□□ -0.43
CSMD2-202ENST00000338325 PRPF40AO75400 957 aaKnown RBP12.38□□□□□ -0.43
CSMD2-202ENST00000338325 TADA3O75528 432 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 KRT18P05783 430 aaKnown RBP12.38□□□□□ -0.43
CSMD2-202ENST00000338325 GJA4P35212 333 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 GPR15P49685 360 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 MTF1Q14872 753 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
CSMD2-202ENST00000338325 NAIF1Q69YI7 327 aaPredicted RBP12.38□□□□□ -0.43
CSMD2-202ENST00000338325 SLFN12LQ6IEE8 588 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 STKLD1Q8NE28 680 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 LEO1Q8WVC0 666 aaPredicted RBP12.38□□□□□ -0.43
CSMD2-202ENST00000338325 CD101Q93033 1021 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 PI4K2AQ9BTU6 479 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 BLOC1S4Q9NUP1 217 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 TMLHEQ9NVH6 421 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
CSMD2-202ENST00000338325 EBF1Q9UH73 591 aa12.38□□□□□ -0.43
CSMD2-202ENST00000338325 AGO2Q9UKV8 859 aaKnown RBP12.38□□□□□ -0.43
CSMD2-202ENST00000338325 BCLAF3A2AJT9 711 aaKnown RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 TISP43B9A030 160 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 DCLK1O15075 740 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 CAVIN2O95810 425 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 PROS1P07225 676 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 UBA7P41226 1012 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 PNPLA4P41247 253 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 CREB5Q02930 508 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 FAM160A1Q05DH4 1040 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 USP4Q13107 963 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 DMC1Q14565 340 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 MCM6Q14566 821 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 ZNF77Q15935 545 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 SDHAF4Q5VUM1 108 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 NT5DC4Q86YG4 428 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 OSCP1Q8WVF1 389 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 ATP2A3Q93084 1043 aa12.37□□□□□ -0.43
CSMD2-202ENST00000338325 TRMT2BQ96GJ1 504 aaKnown RBP12.37□□□□□ -0.43
CSMD2-202ENST00000338325 TMEM206Q9H813 350 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms