RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 NAP1L5Q96NT1 182 aaPredicted RBP12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 PGLYRP2Q96PD5 576 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 ERGIC2Q96RQ1 377 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 LSM14BQ9BX40 385 aaKnown RBP12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 PLCB1Q9NQ66 1216 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 MAN1C1Q9NR34 630 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 FBXW11Q9UKB1 542 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 DNAJC12Q9UKB3 198 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 NLRC5Q86WI3 1866 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 MYO9BQ13459 2157 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 ATP8B3O60423 1300 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 KIAA1671Q9BY89 1806 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 A0A1B0GTH6 734 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 MTMR11A4FU01 709 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 HCRTO43612 131 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 ZMYND10O75800 440 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 HNRNPA1P09651 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 RFX1P22670 979 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 ALDH1A3P47895 512 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 DUSP4Q13115 394 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 PLD1Q13393 1074 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 COL19A1Q14993 1142 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 ARHGAP44Q17R89 818 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 ZNF394Q53GI3 561 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 VN1R2Q8NFZ6 395 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 NEK11Q8NG66 645 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 FUBP3Q96I24 572 aaKnown RBP eCLIP12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 ARID3AQ99856 593 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 MED10Q9BTT4 135 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 ABCB6Q9NP58 842 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 CRTAC1Q9NQ79 661 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 ZDHHC7Q9NXF8 308 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
SPTLC1-202ENST00000337841 CHD9Q3L8U1 2897 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 A0A1W2PQC6 194 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 TEX33O43247 280 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 XYLBO75191 536 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 SEC24AO95486 1093 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 LRG1P02750 347 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 C8AP07357 584 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 PAEPP09466 180 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 KRT5P13647 590 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 UCHL3P15374 230 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 ACO1P21399 889 aaKnown RBP12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 USP8P40818 1118 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 RAD23BP54727 409 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 RBM10P98175 930 aaKnown RBP12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 MGAT5BQ3V5L5 792 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 CES5AQ6NT32 575 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 TMEM270Q6UE05 265 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 ELMOD1Q8N336 334 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 CMASQ8NFW8 434 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 SLC7A14Q8TBB6 771 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 WHAMMQ8TF30 809 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 KAT5Q92993 513 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 CYFIP2Q96F07 1278 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 KREMEN1Q96MU8 473 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 PKMYT1Q99640 499 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 STK33Q9BYT3 514 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 ELOVL4Q9GZR5 314 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 DPEP3Q9H4B8 488 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 UBE2ZQ9H832 354 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 SFXN1Q9H9B4 322 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 PIDD1Q9HB75 910 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 FAM207AQ9NSI2 230 aaPredicted RBP12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 TMLHEQ9NVH6 421 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 IFNKQ9P0W0 207 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 CLEC1BQ9P126 229 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 SIK3Q9Y2K2 1263 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 NME7Q9Y5B8 376 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 SCN1AP35498 2009 aa12.67□□□□□ -0.38
SPTLC1-202ENST00000337841 PLXNA4Q9HCM2 1894 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 GLP2RO95838 553 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 VDRP11473 427 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 CD19P15391 556 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 KCNA5P22460 613 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 HOXA9P31269 272 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 LTBRP36941 435 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 MAGEA11P43364 429 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 EPHB3P54753 998 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 BPIFB4P59827 614 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 POLR2FP61218 127 aaKnown RBP12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 APBA1Q02410 837 aa12.66□□□□□ -0.38
SPTLC1-202ENST00000337841 ITIH3Q06033 890 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms