RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 SLX1AQ9BQ83 275 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 RTP3Q9BQQ7 232 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 DHRS4Q9BTZ2 278 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 MIS12Q9H081 205 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 CCDC134Q9H6E4 229 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 MED4Q9NPJ6 270 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 IP6K2Q9UHH9 426 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 DDX20Q9UHI6 824 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 HPCAL4Q9UM19 191 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 MYLKQ15746 1914 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 MYADML2A6NDP7 307 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 C2CD4BA6NLJ0 364 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 SYF2O95926 243 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 C1QAP02745 245 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 ITGAVP06756 1048 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 CLCN3P51790 818 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 MYL6P60660 151 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 VSNL1P62760 191 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 CCNG2Q16589 344 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 ACBD5Q5T8D3 534 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 MFSD5Q6N075 450 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 FEZF2Q8TBJ5 459 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 CAGE1Q8TC20 777 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 MTMR12Q9C0I1 747 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 RPF1Q9H9Y2 349 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 RBM12Q9NTZ6 932 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 HDAC6Q9UBN7 1215 aa5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 NOC2LQ9Y3T9 749 aaKnown RBP5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 FARP1Q9Y4F1 1045 aaPredicted RBP5.7□□□□□ -1.5
PRPF4B-201ENST00000337659 C7P10643 843 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TMEM132DQ14C87 1099 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 SLC14A2Q15849 920 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 UPP1Q16831 310 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TRNP1Q6NT89 227 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 PAQR9Q6ZVX9 377 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TDRPQ86YL5 185 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF564Q8TBZ8 553 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 WNT8BQ93098 351 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 NTAN1Q96AB6 310 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 C18orf25Q96B23 403 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TOX2Q96NM4 488 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 ARID3AQ99856 593 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TSPYL2Q9H2G4 693 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 CDHR5Q9HBB8 845 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 OSGEPQ9NPF4 335 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 GUCA1BQ9UMX6 200 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TFR2Q9UP52 801 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 PTCH2Q9Y6C5 1203 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 IVNS1ABPQ9Y6Y0 642 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 A0A0U1RQF3 1178 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 THAP12O43422 761 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 RAD21O60216 631 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF286BP0CG31 522 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TNFAIP3P21580 790 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 RFC2P35250 354 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF157P51786 506 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 OGDHQ02218 1023 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 CAV1Q03135 178 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TAF1CQ15572 869 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 SOWAHAQ2M3V2 549 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 WDR44Q5JSH3 913 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 GDF6Q6KF10 455 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 SLC13A5Q86YT5 568 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 CCDC117Q8IWD4 279 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 THNSL1Q8IYQ7 743 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 PLCD3Q8N3E9 789 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 LINC01599Q8WXQ3 324 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 CTNNBL1Q8WYA6 563 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 APBB2Q92870 758 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 OLFM3Q96PB7 478 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 CRACR2AQ9BSW2 395 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 AMFRQ9UKV5 643 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 LRRIQ4A6NIV6 560 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 WASH4PA8MWX3 477 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 DNM1LO00429 736 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 PODXLO00592 558 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 XPO1O14980 1071 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 IPO7O95373 1038 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TNNC2P02585 160 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 CFHP08603 1231 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 GNA15P30679 374 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 CDKN2BP42772 138 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 ZNF143P52747 638 aaPredicted RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 RPS6KA1Q15418 735 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 MFSD14CQ5VZR4 134 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 C4orf22Q6V702 233 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 RCOR2Q8IZ40 523 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 PCSK9Q8NBP7 692 aaKnown RBP5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 ARRDC4Q8NCT1 418 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 STON2Q8WXE9 905 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TADA1Q96BN2 335 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TLCD1Q96CP7 247 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 ACAP3Q96P50 834 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 SLITRK1Q96PX8 696 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 C19orf43Q9BQ61 176 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 TMEM175Q9BSA9 504 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 PPCSQ9HAB8 311 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 SLC38A7Q9NVC3 462 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 DPP3Q9NY33 737 aa5.69□□□□□ -1.5
PRPF4B-201ENST00000337659 LGALS13Q9UHV8 139 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms