RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
RTN4-202ENST00000337526 LRRIQ1Q96JM4 1722 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 OGTO15294 1046 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 PROSCO94903 275 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 UBTFL6P0CB48 400 aaPredicted RBP14.33□□□□□ -0.11
RTN4-202ENST00000337526 ACADSBP45954 432 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 HDAC4P56524 1084 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 SZRD1Q7Z422 152 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 NUP93Q8N1F7 819 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 ZNF507Q8TCN5 953 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 TSPAN17Q96FV3 270 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 POLLQ9UGP5 575 aa14.33□□□□□ -0.11
RTN4-202ENST00000337526 DIP2AQ14689 1571 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 CPB1P15086 417 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 RCN1Q15293 331 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 TBCCQ15814 346 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 CCNG2Q16589 344 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 ELMO2Q96JJ3 720 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 DACH2Q96NX9 599 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 KDM4CQ9H3R0 1056 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 ARHGAP26Q9UNA1 814 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 CD4P01730 458 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 ITGB3P05106 788 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 GARTP22102 1010 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 OTUD4Q01804 1114 aaKnown RBP14.33□□□□□ -0.12
RTN4-202ENST00000337526 VPS72Q15906 364 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 EFHC1Q5JVL4 640 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 PRAMEF18Q5VWM3 479 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 NUDT12Q9BQG2 462 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 MRGBPQ9NV56 204 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 PKD2L2Q9NZM6 624 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.33□□□□□ -0.12
RTN4-202ENST00000337526 AFF4Q9UHB7 1163 aaKnown RBP14.33□□□□□ -0.12
RTN4-202ENST00000337526 SLC39A10Q9ULF5 831 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 TECPR2O15040 1411 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 HBP1O60381 514 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 ESRRBO95718 433 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 COPAP53621 1224 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 TMEM62Q0P6H9 643 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 MYBPC2Q14324 1141 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 SETD3Q86TU7 594 aaPredicted RBP14.33□□□□□ -0.12
RTN4-202ENST00000337526 OR6J1Q8NGC5 347 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 TMC2Q8TDI7 906 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 SLC35C1Q96A29 364 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 TMEM121Q9BTD3 319 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 KCND1Q9NSA2 647 aa14.33□□□□□ -0.12
RTN4-202ENST00000337526 O00370 1275 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 DYNC1LI2O43237 492 aaPredicted RBP14.32□□□□□ -0.12
RTN4-202ENST00000337526 BMP6P22004 513 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 GRIK1P39086 918 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 IRX1P78414 480 aaPredicted RBP14.32□□□□□ -0.12
RTN4-202ENST00000337526 Q4G0T1 1027 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 EXD1Q8NHP7 514 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 SLC7A14Q8TBB6 771 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 URGCPQ8TCY9 931 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 ELP3Q9H9T3 547 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 ZNF446Q9NWS9 450 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 ERAP1Q9NZ08 941 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 DDX20Q9UHI6 824 aaKnown RBP14.32□□□□□ -0.12
RTN4-202ENST00000337526 RPS6KL1Q9Y6S9 549 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 FAM237AA0A1B0GTK4 181 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 DGKIO75912 1065 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 HNRNPCP07910 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
RTN4-202ENST00000337526 RANBP1P43487 201 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 PDAP1Q13442 181 aaKnown RBP14.32□□□□□ -0.12
RTN4-202ENST00000337526 RBBP7Q16576 425 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 SUGP1Q8IWZ8 645 aaKnown RBP14.32□□□□□ -0.12
RTN4-202ENST00000337526 AENQ8WTP8 325 aaKnown RBP14.32□□□□□ -0.12
RTN4-202ENST00000337526 PRMT6Q96LA8 375 aaPredicted RBP14.32□□□□□ -0.12
RTN4-202ENST00000337526 ADNPQ9H2P0 1102 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 KIF17Q9P2E2 1029 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 ZNF711Q9Y462 761 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 MAP2K7O14733 419 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 ACADSP16219 412 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 MCL1Q07820 350 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 ANO4Q32M45 955 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 SLC5A5Q92911 643 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 BLOC1S4Q9NUP1 217 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 CDYLQ9Y232 598 aa14.32□□□□□ -0.12
RTN4-202ENST00000337526 MTSS1O43312 755 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 GOLGA7BQ2TAP0 167 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 C11orf63Q6NUN7 778 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 TMC3Q7Z5M5 1100 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 IPMKQ8NFU5 416 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 NAF1Q96HR8 494 aaKnown RBP14.31□□□□□ -0.12
RTN4-202ENST00000337526 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 MTMR12Q9C0I1 747 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 NAALADL1Q9UQQ1 740 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 ZBTB39O15060 712 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 TMCC1O94876 653 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 NLRP11P59045 1033 aaKnown RBP14.31□□□□□ -0.12
RTN4-202ENST00000337526 SPATA2LQ8IUW3 424 aaPredicted RBP14.31□□□□□ -0.12
RTN4-202ENST00000337526 DEFB129Q9H1M3 183 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 CASS4Q9NQ75 786 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 NSMCE4AQ9NXX6 385 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 PJA2O43164 708 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 HMOX2P30519 316 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 ZNF844Q08AG5 666 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms