RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 IGSF9BQ9UPX0 1349 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 UBXN8O00124 270 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 PSTPIP1O43586 416 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 UBTFL6P0CB48 400 aaPredicted RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 C3orf62Q6ZUJ4 267 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 HEATR4Q86WZ0 1026 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 SUGP1Q8IWZ8 645 aaKnown RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 MRPL48Q96GC5 212 aaKnown RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 GPR101Q96P66 508 aaPredicted RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 CHMP2BQ9UQN3 213 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 EIF3LQ9Y262 564 aaKnown RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 PRDM15P57071 1507 aaPredicted RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 TMEM120BA0PK00 339 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 MAGEA13PA6NCF6 341 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 CSPG5O95196 566 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 SLC25A27O95847 323 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 SFSWAPQ12872 951 aaKnown RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 EMC2Q15006 297 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 COBLL1Q53SF7 1204 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 VPS50Q96JG6 964 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 CLEC4MQ9H2X3 399 aaPredicted RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 ALG13Q9NP73 1137 aaKnown RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 TK2O00142 265 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 COPAP53621 1224 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 CCZ1BP86790 482 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 CCZ1P86791 482 aaPredicted RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 DDX53Q86TM3 631 aaKnown RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 AHI1Q8N157 1196 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 NAT9Q9BTE0 207 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 SPATA31A3Q5VYP0 1347 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 HEATR9A2RTY3 570 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 CYTH3O43739 400 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 TRIM13O60858 407 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 CYP19A1P11511 503 aaPredicted RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 SPATA18Q8TC71 538 aa13.61□□□□□ -0.23
HLCS-201ENST00000336648 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 FAM84BQ96KN1 310 aaPredicted RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 ZCCHC17Q9NP64 241 aaKnown RBP13.61□□□□□ -0.23
HLCS-201ENST00000336648 GLRA3O75311 464 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 PSMA4P25789 261 aaKnown RBP13.6□□□□□ -0.23
HLCS-201ENST00000336648 GEMP55040 296 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 LRRC36Q1X8D7 754 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 IL31Q6EBC2 164 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 CPA5Q8WXQ8 436 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 LRRC39Q96DD0 335 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 OLFM1Q99784 485 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 KIAA1257Q9ULG3 409 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 RRN3P2A6NIE6 340 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 VWA5AO00534 786 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 AIM2O14862 343 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 CYP27B1O15528 508 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 PTGER2P43116 358 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 FXR2P51116 673 aaKnown RBP eCLIP13.6□□□□□ -0.23
HLCS-201ENST00000336648 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
HLCS-201ENST00000336648 AGAP9Q5VTM2 703 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 CACHD1Q5VU97 1274 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 GPR141Q7Z602 305 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 ADCK2Q7Z695 626 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 AGAP3Q96P47 875 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 DTNAQ9Y4J8 743 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 RNF103O00237 685 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 CD302Q8IX05 232 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 C4orf33Q8N1A6 199 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 C9orf72Q96LT7 481 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 CRAMP1Q96RY5 1269 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 MUC3BQ9H195 1237 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 RMND5AQ9H871 391 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 GTF3C4Q9UKN8 822 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 ARHGEF40Q8TER5 1519 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 LAMC1P11047 1609 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 ZNF839A8K0R7 811 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 SLCO1B7G3V0H7 640 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 CNTFP26441 200 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 ITIH4Q14624 930 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.6□□□□□ -0.23
HLCS-201ENST00000336648 KLHL18O94889 574 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 CNTN1Q12860 1018 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 RABL6Q3YEC7 729 aaPredicted RBP13.6□□□□□ -0.23
HLCS-201ENST00000336648 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 FBXW10Q5XX13 1052 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 PRPF39Q86UA1 669 aaKnown RBP13.6□□□□□ -0.23
HLCS-201ENST00000336648 KRT78Q8N1N4 520 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 PABPC5Q96DU9 382 aaKnown RBP13.6□□□□□ -0.23
HLCS-201ENST00000336648 ERGIC2Q96RQ1 377 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 ILKAPQ9H0C8 392 aaPredicted RBP13.6□□□□□ -0.23
HLCS-201ENST00000336648 DLGAP2Q9P1A6 1054 aa13.6□□□□□ -0.23
HLCS-201ENST00000336648 PRR36Q9H6K5 1346 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 TRIM24O15164 1050 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 USP1O94782 785 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 HLA-DRAP01903 254 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 THRAP10827 490 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 ITGA4P13612 1032 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 COMTP21964 271 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 PPP3CCP48454 512 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 POU4F1Q01851 419 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 HES6Q96HZ4 224 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms