RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 B3GALNT2Q8NCR0 500 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 MRPL38Q96DV4 380 aaKnown RBP18.64■□□□□ 0.57
CHGA-202ENST00000334654 SPAG5Q96R06 1193 aa18.64■□□□□ 0.57
CHGA-202ENST00000334654 PLXNA3P51805 1871 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.63■□□□□ 0.57
CHGA-202ENST00000334654 WDR27A2RRH5 827 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 PAEPP09466 180 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 KRT5P13647 590 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 STAT1P42224 750 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 ROR1Q01973 937 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 GOLGA8FQ08AF8 430 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 GOLGA8DPQ0D2H9 430 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 GPR17Q13304 367 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 RAB33AQ14088 237 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 TRIM14Q14142 442 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 PAQR9Q6ZVX9 377 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 IRF2BP2Q7Z5L9 587 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 ADGRD2Q7Z7M1 963 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 GPIHBP1Q8IV16 184 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 GLYCTKQ8IVS8 523 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 MICAL1Q8TDZ2 1067 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 TFAP2BQ92481 460 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 TNIP3Q96KP6 325 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 AIPL1Q9NZN9 384 aa18.63■□□□□ 0.57
CHGA-202ENST00000334654 LUC7L2Q9Y383 392 aaKnown RBP18.63■□□□□ 0.57
CHGA-202ENST00000334654 MTCL1Q9Y4B5 1905 aaKnown RBP18.62■□□□□ 0.57
CHGA-202ENST00000334654 GFPT2O94808 682 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 ABLIM3O94929 683 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 USP8P40818 1118 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 CDR1P51861 262 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 ADGRE1Q14246 886 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 SLC39A12Q504Y0 691 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 MDH1BQ5I0G3 518 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 LILRA6Q6PI73 481 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 RNF19BQ6ZMZ0 732 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 MYCBPAPQ8TBZ2 947 aa18.62■□□□□ 0.57
CHGA-202ENST00000334654 REV3LO60673 3130 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 MFAP3LO75121 409 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 POU3F3P20264 500 aaPredicted RBP18.61■□□□□ 0.57
CHGA-202ENST00000334654 KRT9P35527 623 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 NDUFV1P49821 464 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 ADKP55263 362 aaKnown RBP18.61■□□□□ 0.57
CHGA-202ENST00000334654 ARPP19P56211 112 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 TSPY1Q01534 308 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 CREMQ03060 361 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 ZNF697Q5TEC3 545 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 GPR153Q6NV75 609 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 SLC47A2Q86VL8 602 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 PPFIBP1Q86W92 1011 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 TC2NQ8N9U0 490 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 PCED1BQ96HM7 432 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 HEXIM2Q96MH2 286 aaKnown RBP18.61■□□□□ 0.57
CHGA-202ENST00000334654 DNAJC7Q99615 494 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 B3GNT5Q9BYG0 378 aa18.61■□□□□ 0.57
CHGA-202ENST00000334654 VDRP11473 427 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 HNRNPH3P31942 346 aaKnown RBP18.6■□□□□ 0.57
CHGA-202ENST00000334654 BMS1Q14692 1282 aaKnown RBP18.6■□□□□ 0.57
CHGA-202ENST00000334654 PPP1R26Q5T8A7 1209 aaPredicted RBP18.6■□□□□ 0.57
CHGA-202ENST00000334654 ARHGAP17Q68EM7 881 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 DCP1BQ8IZD4 617 aaKnown RBP18.6■□□□□ 0.57
CHGA-202ENST00000334654 FUKQ8N0W3 1084 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 ZNF461Q8TAF7 563 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 OLIG1Q8TAK6 271 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 EPS8L1Q8TE68 723 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 DDX1Q92499 740 aaKnown RBP18.6■□□□□ 0.57
CHGA-202ENST00000334654 SYN2Q92777 582 aaPredicted RBP18.6■□□□□ 0.57
CHGA-202ENST00000334654 FAM161BQ96MY7 647 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 CRISPLD1Q9H336 500 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 FAM49BQ9NUQ9 324 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 LMCD1Q9NZU5 365 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 KIAA1257Q9ULG3 409 aa18.6■□□□□ 0.57
CHGA-202ENST00000334654 MYH10P35580 1976 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 MTMR11A4FU01 709 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 CLDN5O00501 218 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 CLASP2O75122 1294 aaKnown RBP18.59■□□□□ 0.57
CHGA-202ENST00000334654 CFHP08603 1231 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 CCDC130P13994 396 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 CPB1P15086 417 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 CYP11B1P15538 503 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 BRD2P25440 801 aaKnown RBP18.59■□□□□ 0.57
CHGA-202ENST00000334654 CA8P35219 290 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 PTPROQ16827 1216 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 SFMBT2Q5VUG0 894 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 HGSNATQ68CP4 663 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 WDR59Q6PJI9 974 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 NOP9Q86U38 636 aaKnown RBP18.59■□□□□ 0.57
CHGA-202ENST00000334654 PALB2Q86YC2 1186 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 SPC24Q8NBT2 197 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 ATAD1Q8NBU5 361 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 ZNF397Q8NF99 534 aaPredicted RBP18.59■□□□□ 0.57
CHGA-202ENST00000334654 ZNF606Q8WXB4 792 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 MYLPFQ96A32 169 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 CYFIP2Q96F07 1278 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 HNRNPABQ99729 332 aaKnown RBP18.59■□□□□ 0.57
CHGA-202ENST00000334654 SYT11Q9BT88 431 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 EMILIN2Q9BXX0 1053 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 TMEM30AQ9NV96 361 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 NOCTQ9UK39 431 aaKnown RBP18.59■□□□□ 0.57
CHGA-202ENST00000334654 MTCH2Q9Y6C9 303 aa18.59■□□□□ 0.57
CHGA-202ENST00000334654 AKR1B15C9JRZ8 316 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms