RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 GRIK4Q16099 956 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 C6orf118Q5T5N4 469 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 SPOCD1Q6ZMY3 1216 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 ANKRD23Q86SG2 305 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 ELOVL4Q9GZR5 314 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 GEMIN8Q9NWZ8 242 aaKnown RBP18.37■□□□□ 0.53
DDX28-201ENST00000332395 ANAPC5Q9UJX4 755 aa18.37■□□□□ 0.53
DDX28-201ENST00000332395 SIGLEC16A6NMB1 481 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 MMP3P08254 477 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 KRT3P12035 628 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 COPS2P61201 443 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 GRB14Q14449 540 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 DUSP28Q4G0W2 176 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 MARCH8Q5T0T0 291 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 NLRP14Q86W24 1093 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 MICALL1Q8N3F8 863 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 EPS8L3Q8TE67 593 aaKnown RBP18.36■□□□□ 0.53
DDX28-201ENST00000332395 RAPGEF5Q92565 580 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 ACSF2Q96CM8 615 aaPredicted RBP18.36■□□□□ 0.53
DDX28-201ENST00000332395 TMEM176AQ96HP8 235 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 HPDLQ96IR7 371 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 MAML3Q96JK9 1138 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 CPXM1Q96SM3 734 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 DDX23Q9BUQ8 820 aaKnown RBP18.36■□□□□ 0.53
DDX28-201ENST00000332395 CNOT10Q9H9A5 744 aaKnown RBP18.36■□□□□ 0.53
DDX28-201ENST00000332395 CYP3A43Q9HB55 503 aa18.36■□□□□ 0.53
DDX28-201ENST00000332395 PPANQ9NQ55 473 aaKnown RBP18.36■□□□□ 0.53
DDX28-201ENST00000332395 DDX56Q9NY93 547 aaKnown RBP18.36■□□□□ 0.53
DDX28-201ENST00000332395 E7EVH7 732 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 LIASO43766 372 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 P4HA1P13674 534 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 PSMA2P25787 234 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 KLRC2P26717 231 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 PSMC1P62191 440 aaKnown RBP18.35■□□□□ 0.53
DDX28-201ENST00000332395 GSTA5Q7RTV2 222 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 JOSD2Q8TAC2 188 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 AGAP1Q9UPQ3 857 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 C2CD2Q9Y426 696 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 A0A1B0GUA9 196 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 LRRD1A4D1F6 860 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 RASGRF2O14827 1237 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 ACSL3O95573 720 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 HOXD8P13378 290 aaPredicted RBP18.35■□□□□ 0.53
DDX28-201ENST00000332395 PTPN7P35236 360 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 LMNB2Q03252 620 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 TFDP3Q5H9I0 405 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 KIAA0319LQ8IZA0 1049 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 BBOF1Q8ND07 529 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 MYCBPAPQ8TBZ2 947 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 ACAP3Q96P50 834 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 CCT8L2Q96SF2 557 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 ADPGKQ9BRR6 497 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 SYNCQ9H7C4 482 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 DNPEPQ9ULA0 475 aa18.35■□□□□ 0.53
DDX28-201ENST00000332395 hCG_1818297A0A087WSY0 165 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 MICAL2O94851 1124 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 AGTP01019 485 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 SLCO1A2P46721 670 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 GSCP56915 257 aaPredicted RBP18.34■□□□□ 0.53
DDX28-201ENST00000332395 DRICH1Q6PGQ1 229 aaPredicted RBP18.34■□□□□ 0.53
DDX28-201ENST00000332395 POLNQ7Z5Q5 900 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 XYLT1Q86Y38 959 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 OR6J1Q8NGC5 347 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 FNIP1Q8TF40 1166 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 ZNF473Q8WTR7 871 aaKnown RBP18.34■□□□□ 0.53
DDX28-201ENST00000332395 TINF2Q9BSI4 451 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 WDR35Q9P2L0 1181 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 ITGA11Q9UKX5 1188 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDX28-201ENST00000332395 TRAPPC3O43617 180 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 ITGBL1O95965 494 aaPredicted RBP18.34■□□□□ 0.53
DDX28-201ENST00000332395 FAM107AO95990 144 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 ERBB2P04626 1255 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 CDKN2BP42772 138 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 CDR1P51861 262 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 IFI35P80217 286 aaPredicted RBP18.34■□□□□ 0.53
DDX28-201ENST00000332395 ACVR2BQ13705 512 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 DGKDQ16760 1214 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 IZUMO3Q5VZ72 239 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 PRUNE1Q86TP1 453 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 ZNF410Q86VK4 478 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 ROPN1BQ9BZX4 212 aaPredicted RBP18.34■□□□□ 0.53
DDX28-201ENST00000332395 ABHD16BQ9H3Z7 469 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 ROPN1Q9HAT0 212 aaPredicted RBP18.34■□□□□ 0.53
DDX28-201ENST00000332395 DNAJC17Q9NVM6 304 aaKnown RBP18.34■□□□□ 0.53
DDX28-201ENST00000332395 DPP3Q9NY33 737 aa18.34■□□□□ 0.53
DDX28-201ENST00000332395 M0QYV0 167 aa18.33■□□□□ 0.52
DDX28-201ENST00000332395 LRCH4O75427 683 aa18.33■□□□□ 0.52
DDX28-201ENST00000332395 TTC4O95801 387 aa18.33■□□□□ 0.52
DDX28-201ENST00000332395 SLC25A11Q02978 314 aaKnown RBP18.33■□□□□ 0.52
DDX28-201ENST00000332395 SWT1Q5T5J6 900 aaKnown RBP18.33■□□□□ 0.52
DDX28-201ENST00000332395 PWWP2AQ96N64 755 aa18.33■□□□□ 0.52
DDX28-201ENST00000332395 STMN4Q9H169 189 aaPredicted RBP18.33■□□□□ 0.52
DDX28-201ENST00000332395 METTL5Q9NRN9 209 aaKnown RBP18.33■□□□□ 0.52
DDX28-201ENST00000332395 ZNF148Q9UQR1 794 aa18.33■□□□□ 0.52
DDX28-201ENST00000332395 FAM169AQ9Y6X4 670 aa18.33■□□□□ 0.52
DDX28-201ENST00000332395 CITO14578 2027 aa18.33■□□□□ 0.52
DDX28-201ENST00000332395 GMNCA6NCL1 334 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 MMP13P45452 471 aa18.32■□□□□ 0.52
DDX28-201ENST00000332395 RBP5P82980 135 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms