RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 RAPGEF1Q13905 1077 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 SOWAHAQ2M3V2 549 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 PDE12Q6L8Q7 609 aaKnown RBP10.09□□□□□ -0.79
C11orf54-201ENST00000331239 OTOP2Q7RTS6 562 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 DDX53Q86TM3 631 aaKnown RBP10.09□□□□□ -0.79
C11orf54-201ENST00000331239 ZNF280BQ86YH2 543 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 CXCL16Q9H2A7 254 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 SNX25Q9H3E2 840 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 HSFX1Q9UBD0 423 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 CDH9Q9ULB4 789 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 ZMYND8Q9ULU4 1186 aaPredicted RBP10.09□□□□□ -0.79
C11orf54-201ENST00000331239 PCDHGC3Q9UN70 934 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 PCDHB4Q9Y5E5 795 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 SNX9Q9Y5X1 595 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 ZBBXA8MT70 800 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 RBAK-RBAKDNI3L0D1 243 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 LSM8O95777 96 aaKnown RBP10.09□□□□□ -0.79
C11orf54-201ENST00000331239 GZMAP12544 262 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 GNL1P36915 607 aaPredicted RBP10.09□□□□□ -0.79
C11orf54-201ENST00000331239 SNX16P57768 344 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 CYP27A1Q02318 531 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 MRPL58Q14197 206 aaKnown RBP10.09□□□□□ -0.79
C11orf54-201ENST00000331239 RAB30Q15771 203 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 KCNT2Q6UVM3 1135 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 RTL10Q7L3V2 364 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 SLC39A11Q8N1S5 342 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 C2orf15Q8WU43 125 aaKnown RBP10.09□□□□□ -0.79
C11orf54-201ENST00000331239 TMEM176AQ96HP8 235 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 IGSF21Q96ID5 467 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 PI4K2AQ9BTU6 479 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 HERC2P3Q9BVR0 1158 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 NLRC4Q9NPP4 1024 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 CYLDQ9NQC7 956 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 INTUQ9ULD6 942 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 STXBP5LQ9Y2K9 1186 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 BACE2Q9Y5Z0 518 aa10.09□□□□□ -0.79
C11orf54-201ENST00000331239 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.08□□□□□ -0.8
C11orf54-201ENST00000331239 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.08□□□□□ -0.8
C11orf54-201ENST00000331239 MACROD2A1Z1Q3 448 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 CASTOR2A6NHX0 329 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 SETSIPP0DME0 302 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 MCM3P25205 808 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 OR1G1P47890 313 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 SLC11A1P49279 550 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 AFF1P51825 1210 aaKnown RBP10.08□□□□□ -0.8
C11orf54-201ENST00000331239 KRT17Q04695 432 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 KLHL30Q0D2K2 578 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 CNGA2Q16280 664 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 HGSNATQ68CP4 663 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 ANKS3Q6ZW76 656 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 ADGRF2Q8IZF7 708 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 COLGALT1Q8NBJ5 622 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 MMS19Q96T76 1030 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 SYT11Q9BT88 431 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 MIS12Q9H081 205 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.08□□□□□ -0.8
C11orf54-201ENST00000331239 NXF1Q9UBU9 619 aaKnown RBP10.08□□□□□ -0.8
C11orf54-201ENST00000331239 TSC2P49815 1807 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 ZNF263O14978 683 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 SPTLC1O15269 473 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 PLEKP08567 350 aaPredicted RBP10.08□□□□□ -0.8
C11orf54-201ENST00000331239 PDE6CP51160 858 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 GUCY2FP51841 1108 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 KIF11P52732 1056 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 CDR2Q01850 454 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 CASP8Q14790 479 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 USP41Q3LFD5 358 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 TIGD5Q53EQ6 642 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 SPOPLQ6IQ16 392 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 RBBP8NLQ8NC74 664 aaPredicted RBP10.08□□□□□ -0.8
C11orf54-201ENST00000331239 CAPZA3Q96KX2 299 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 ARHGAP20Q9P2F6 1191 aa10.08□□□□□ -0.8
C11orf54-201ENST00000331239 PPEF2O14830 753 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 TLL1O43897 1013 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 SRGAP2O75044 1071 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 CYP11B1P15538 503 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 SYN1P17600 705 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 CDH5P33151 784 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 RAD23BP54727 409 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 ARHGAP44Q17R89 818 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 ASTE1Q2TB18 679 aaPredicted RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 FUT10Q6P4F1 479 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 TMEM270Q6UE05 265 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 DCP1BQ8IZD4 617 aaKnown RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 TRIM58Q8NG06 486 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 STK32AQ8WU08 396 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 KBTBD7Q8WVZ9 684 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 VCPIP1Q96JH7 1222 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 RNPC3Q96LT9 517 aaKnown RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 UBE2OQ9C0C9 1292 aaKnown RBP10.07□□□□□ -0.8
C11orf54-201ENST00000331239 LMAN2LQ9H0V9 348 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 ACBD3Q9H3P7 528 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 DEF6Q9H4E7 631 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 GOLGA2P5Q9HBQ8 144 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 CHST7Q9NS84 486 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 TMEM51Q9NW97 253 aa10.07□□□□□ -0.8
C11orf54-201ENST00000331239 MARCH5Q9NX47 278 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms