RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 SIPA1L1O43166 1804 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 LYPLA2O95372 231 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 GLRA2P23416 452 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 RTP1P59025 263 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 XIAPP98170 497 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 CBLBQ13191 982 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 MAMLD1Q13495 774 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 GRM2Q14416 872 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 AOC3Q16853 763 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 DNAL1Q4LDG9 190 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 RASIP1Q5U651 963 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 CDC42EP5Q6NZY7 148 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 IZUMO2Q6UXV1 221 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 MARK2Q7KZI7 788 aaKnown RBP11.84□□□□□ -0.51
GINS3-202ENST00000328514 HAUS6Q7Z4H7 955 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 NLRX1Q86UT6 975 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 LRRC6Q86X45 466 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
GINS3-202ENST00000328514 CBWD2Q8IUF1 395 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 TAS1R2Q8TE23 839 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 PRR11Q96HE9 360 aaPredicted RBP11.84□□□□□ -0.51
GINS3-202ENST00000328514 SLITRK1Q96PX8 696 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 TUBGCP5Q96RT8 1024 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 FAM118BQ9BPY3 351 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 TEKT3Q9BXF9 490 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 UBE2OQ9C0C9 1292 aaKnown RBP11.84□□□□□ -0.51
GINS3-202ENST00000328514 NDE1Q9NXR1 346 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 SLC17A7Q9P2U7 560 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 POLLQ9UGP5 575 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 STRIP2Q9ULQ0 834 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 PPME1Q9Y570 386 aa11.84□□□□□ -0.51
GINS3-202ENST00000328514 BUD23O43709 281 aaKnown RBP11.83□□□□□ -0.52
GINS3-202ENST00000328514 FKBP6O75344 327 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 NDUFB10O96000 172 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 VIL1P09327 827 aaKnown RBP11.83□□□□□ -0.52
GINS3-202ENST00000328514 UBTFL6P0CB48 400 aaPredicted RBP11.83□□□□□ -0.52
GINS3-202ENST00000328514 ARL4CP56559 192 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 CDC16Q13042 620 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 C6orf163Q5TEZ5 329 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 SLC30A10Q6XR72 485 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 TMEM179Q6ZVK1 233 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 SCUBE1Q8IWY4 988 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.83□□□□□ -0.52
GINS3-202ENST00000328514 APOPT1Q96IL0 206 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 C7orf26Q96N11 449 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 ZNF577Q9BSK1 485 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 NDUFA13Q9P0J0 144 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 EXOC7Q9UPT5 735 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 SSX2IPQ9Y2D8 614 aa11.83□□□□□ -0.52
GINS3-202ENST00000328514 SMIM31A0A1B0GVY4 71 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 B2RBV5 119 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 CIB2O75838 187 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 BBOX1O75936 387 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 ZSCAN5DPP0CG00 497 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 ECE1P42892 770 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 SNAP25P60880 206 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 MAP3K10Q02779 954 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
GINS3-202ENST00000328514 TFDP1Q14186 410 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 APOBEC3HQ6NTF7 200 aaKnown RBP11.82□□□□□ -0.52
GINS3-202ENST00000328514 C15orf39Q6ZRI6 1047 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 RIPOR1Q6ZS17 1223 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 SMIM5Q71RC9 77 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 SV2AQ7L0J3 742 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 LCA5Q86VQ0 697 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 ST13P4Q8IZP2 240 aaPredicted RBP11.82□□□□□ -0.52
GINS3-202ENST00000328514 SLC35B2Q8TB61 432 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 PYROXD1Q8WU10 500 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 CPA5Q8WXQ8 436 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 FAM161BQ96MY7 647 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 PANX3Q96QZ0 392 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 FRMD8P1Q9BZ68 369 aaPredicted RBP11.82□□□□□ -0.52
GINS3-202ENST00000328514 NMUR2Q9GZQ4 415 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 EHMT1Q9H9B1 1298 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 IP6K2Q9UHH9 426 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 WDR91A4D1P6 747 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 AP1G1O43747 822 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 ATP9BO43861 1147 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 PYGLP06737 847 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 P4HBP07237 508 aaKnown RBP11.82□□□□□ -0.52
GINS3-202ENST00000328514 MYL2P10916 166 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 KRT5P13647 590 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 CD58P19256 250 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 RARRES1P49788 294 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 CLCN2P51788 898 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 NOP14P78316 857 aaKnown RBP11.82□□□□□ -0.52
GINS3-202ENST00000328514 GTF2IP78347 998 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 PHLDB2Q86SQ0 1253 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 TTC7BQ86TV6 843 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 MAP4K3Q8IVH8 894 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 PPIL6Q8IXY8 311 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 ULK2Q8IYT8 1036 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 NME8Q8N427 588 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 CERS5Q8N5B7 392 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 NAT8LQ8N9F0 302 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 RBM15BQ8NDT2 890 aaKnown RBP11.82□□□□□ -0.52
GINS3-202ENST00000328514 PIP4K2CQ8TBX8 421 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 COA1Q9GZY4 146 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 SORCS3Q9UPU3 1222 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms