RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 PDCD7Q8N8D1 485 aaKnown RBP15.36■□□□□ 0.05
SSBP3-201ENST00000326956 MIPEPQ99797 713 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 IQCGQ9H095 443 aaKnown RBP15.36■□□□□ 0.05
SSBP3-201ENST00000326956 RABGEF1Q9UJ41 708 aa15.36■□□□□ 0.05
SSBP3-201ENST00000326956 MTO1Q9Y2Z2 717 aaKnown RBP15.36■□□□□ 0.05
SSBP3-201ENST00000326956 GSC2O15499 205 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 CALB1P05937 261 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 ITGAVP06756 1048 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 FESP07332 822 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 PLEKHG4Q58EX7 1191 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 TDRD10Q5VZ19 366 aaKnown RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 ANO5Q75V66 913 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 PDIK1LQ8N165 341 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 DTX3LQ8TDB6 740 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 ZNF333Q96JL9 665 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 GINM1Q9NU53 330 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 DDX56Q9NY93 547 aaKnown RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 CPSF2Q9P2I0 782 aaKnown RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 SPDYE5A6NIY4 337 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 F8VP50 259 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 H0YCG3 227 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 ATP9AO75110 1047 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 NPTXRO95502 500 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 TBXAS1P24557 533 aaPredicted RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 SERPINB3P29508 390 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 GPX6P59796 221 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 KPNB1Q14974 876 aaKnown RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 LRRC6Q86X45 466 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 SCG3Q8WXD2 468 aaKnown RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 TTC17Q96AE7 1141 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 TAAR1Q96RJ0 339 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 SYT15Q9BQS2 421 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 NTPCRQ9BSD7 190 aaKnown RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 C12orf65Q9H3J6 166 aaKnown RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 PAPOLBQ9NRJ5 636 aaKnown RBP15.35■□□□□ 0.05
SSBP3-201ENST00000326956 SLC17A7Q9P2U7 560 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 GABBR1Q9UBS5 961 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 LTBP4Q8N2S1 1624 aa15.35■□□□□ 0.05
SSBP3-201ENST00000326956 hCG_1818297A0A087WSY0 165 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 IQANK1A0A1B0GTG1 560 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 KRT36O76013 467 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 GNAT1P11488 350 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 PAPOLAP51003 745 aaKnown RBP15.34■□□□□ 0.05
SSBP3-201ENST00000326956 MTM1Q13496 603 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 PSMD6Q15008 389 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 OASLQ15646 514 aaKnown RBP15.34■□□□□ 0.05
SSBP3-201ENST00000326956 SGSM1Q2NKQ1 1148 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 LRRC38Q5VT99 294 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 ADGRD1Q6QNK2 874 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 SAMD3Q8N6K7 520 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 FBXO36Q8NEA4 188 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 MCPH1Q8NEM0 835 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 NKD2Q969F2 451 aaPredicted RBP15.34■□□□□ 0.05
SSBP3-201ENST00000326956 TMEM120AQ9BXJ8 343 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 SYNCQ9H7C4 482 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 AGO2Q9UKV8 859 aaKnown RBP15.34■□□□□ 0.05
SSBP3-201ENST00000326956 PCDHA10Q9Y5I2 948 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 TMEM191CA6NGB0 347 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 DKC1O60832 514 aaKnown RBP eCLIP15.34■□□□□ 0.05
SSBP3-201ENST00000326956 CCNE2O96020 404 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 TMEM191BP0C7N4 346 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 CAP2P40123 477 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 SP4Q02446 784 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 SLC34A1Q06495 639 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 ENPEPQ07075 957 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 WDR72Q3MJ13 1102 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 C15orf39Q6ZRI6 1047 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 SYTL5Q8TDW5 730 aaPredicted RBP15.34■□□□□ 0.05
SSBP3-201ENST00000326956 ATP6V0A1Q93050 837 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 ACSS3Q9H6R3 686 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 METTL5Q9NRN9 209 aaKnown RBP15.34■□□□□ 0.05
SSBP3-201ENST00000326956 FETUBQ9UGM5 382 aa15.34■□□□□ 0.05
SSBP3-201ENST00000326956 MAP3K7O43318 606 aa15.33■□□□□ 0.05
SSBP3-201ENST00000326956 ACO1P21399 889 aaKnown RBP15.33■□□□□ 0.05
SSBP3-201ENST00000326956 RFC5P40937 340 aa15.33■□□□□ 0.05
SSBP3-201ENST00000326956 CDK16Q00536 496 aa15.33■□□□□ 0.05
SSBP3-201ENST00000326956 CTC1Q2NKJ3 1217 aa15.33■□□□□ 0.05
SSBP3-201ENST00000326956 C6orf163Q5TEZ5 329 aa15.33■□□□□ 0.05
SSBP3-201ENST00000326956 LRRC74BQ6ZQY2 392 aa15.33■□□□□ 0.05
SSBP3-201ENST00000326956 RMDN3Q96TC7 470 aa15.33■□□□□ 0.05
SSBP3-201ENST00000326956 DEFB129Q9H1M3 183 aa15.33■□□□□ 0.05
SSBP3-201ENST00000326956 RAVER2Q9HCJ3 691 aaKnown RBP15.33■□□□□ 0.05
SSBP3-201ENST00000326956 CLUHO75153 1309 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 NFASCO94856 1347 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 PSMG1O95456 288 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 C4BPAP04003 597 aaKnown RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 INHBAP08476 426 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 SP100P23497 879 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 PIGHQ14442 188 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 ARHGEF16Q5VV41 709 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 NLGN1Q8N2Q7 840 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 ZNF606Q8WXB4 792 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 CYTH2Q99418 400 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 FBXO6Q9NRD1 293 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 RBAKQ9NYW8 714 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 SEPT9Q9UHD8 586 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-201ENST00000326956 LY75O60449 1722 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 DGAT1O75907 488 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 MMP8P22894 467 aa15.33■□□□□ 0.04
SSBP3-201ENST00000326956 PGM1P36871 562 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms