RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PYROXD1Q8WU10 500 aa17.6■□□□□ 0.41
SSH1-201ENST00000326470 SKA1Q96BD8 255 aa17.6■□□□□ 0.41
SSH1-201ENST00000326470 TMEM121Q9BTD3 319 aa17.6■□□□□ 0.41
SSH1-201ENST00000326470 MMADHCQ9H3L0 296 aaPredicted RBP17.6■□□□□ 0.41
SSH1-201ENST00000326470 ACSS3Q9H6R3 686 aa17.6■□□□□ 0.41
SSH1-201ENST00000326470 SYNCQ9H7C4 482 aa17.6■□□□□ 0.41
SSH1-201ENST00000326470 SLC17A7Q9P2U7 560 aa17.6■□□□□ 0.41
SSH1-201ENST00000326470 MTO1Q9Y2Z2 717 aaKnown RBP17.6■□□□□ 0.41
SSH1-201ENST00000326470 COL2A1P02458 1487 aaPredicted RBP17.6■□□□□ 0.41
SSH1-201ENST00000326470 hCG_1818297A0A087WSY0 165 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 GOLGA8SH3BPF8 625 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 GOLGA8MH3BSY2 632 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 CAPN9O14815 690 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 TGDSO95455 350 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 PSMG1O95456 288 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 IFNB1P01574 187 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 SSTR3P32745 418 aaPredicted RBP17.59■□□□□ 0.41
SSH1-201ENST00000326470 RCN2Q14257 317 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 KRT72Q14CN4 511 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 LMBRD2Q68DH5 695 aaPredicted RBP17.59■□□□□ 0.41
SSH1-201ENST00000326470 LRRC74BQ6ZQY2 392 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 SAMD3Q8N6K7 520 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 PTPRN2Q92932 1015 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 IFT43Q96FT9 208 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 AGBL1Q96MI9 1066 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 TSSK1BQ9BXA7 367 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 C17orf75Q9HAS0 396 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 KCNK13Q9HB14 408 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 PCDHB4Q9Y5E5 795 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 ANKRD33BA6NCL7 494 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 TMEM191CA6NGB0 347 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 SGK1O00141 431 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 TBX10O75333 385 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 C4BPAP04003 597 aaKnown RBP17.59■□□□□ 0.41
SSH1-201ENST00000326470 TMEM191BP0C7N4 346 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 CDK16Q00536 496 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 CUL2Q13617 745 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 ZRSR2Q15696 482 aaKnown RBP17.59■□□□□ 0.41
SSH1-201ENST00000326470 SPOPLQ6IQ16 392 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 TMEM270Q6UE05 265 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 C3orf62Q6ZUJ4 267 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 VPS52Q8N1B4 723 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 GALNT15Q8N3T1 639 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 MCUR1Q96AQ8 359 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 HAUS1Q96CS2 278 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.59■□□□□ 0.41
SSH1-201ENST00000326470 TAS2R1Q9NYW7 299 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 STX18Q9P2W9 335 aaKnown RBP17.59■□□□□ 0.41
SSH1-201ENST00000326470 SCOCQ9UIL1 159 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 FEM1BQ9UK73 627 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 CCPG1Q9ULG6 757 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 SNCAIPQ9Y6H5 919 aa17.59■□□□□ 0.41
SSH1-201ENST00000326470 ATP9AO75110 1047 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 SERPINB3P29508 390 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 JAK3P52333 1124 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 ARL4CP56559 192 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 PLCB3Q01970 1234 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 BIRC2Q13490 618 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 TFDP3Q5H9I0 405 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 TDRD10Q5VZ19 366 aaKnown RBP17.58■□□□□ 0.41
SSH1-201ENST00000326470 ANO5Q75V66 913 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 LRRC6Q86X45 466 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 SLC35B2Q8TB61 432 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 ZFAND2BQ8WV99 257 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 C12orf65Q9H3J6 166 aaKnown RBP17.58■□□□□ 0.41
SSH1-201ENST00000326470 C2CD2Q9Y426 696 aa17.58■□□□□ 0.41
SSH1-201ENST00000326470 WDR64B1ANS9 1081 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 GOLGA8RI6L899 631 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 NFIBO00712 420 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 ICAM1P05362 532 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 GSTA2P09210 222 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 ZBTB16Q05516 673 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 ZNF252P-AS1Q0IIN9 211 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 AP1B1Q10567 949 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 PSMD6Q15008 389 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 ZYXQ15942 572 aaKnown RBP17.58■□□□□ 0.4
SSH1-201ENST00000326470 MSS51Q4VC12 460 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 FNBP1LQ5T0N5 605 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 RINLQ6ZS11 566 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 PPIL6Q8IXY8 311 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 DCAKDQ8WVC6 231 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 TMEM120AQ9BXJ8 343 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 PIDD1Q9HB75 910 aa17.58■□□□□ 0.4
SSH1-201ENST00000326470 FBXO6Q9NRD1 293 aaPredicted RBP17.58■□□□□ 0.4
SSH1-201ENST00000326470 EXTL3O43909 919 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 CCNE2O96020 404 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 DHRS4L1P0CG22 281 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 TNNI1P19237 187 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 MMP8P22894 467 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 GAD2Q05329 585 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 RNF220Q5VTB9 566 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 CHSY1Q86X52 802 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 SCYL3Q8IZE3 742 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.57■□□□□ 0.4
SSH1-201ENST00000326470 WDR60Q8WVS4 1066 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 PRMT6Q96LA8 375 aaPredicted RBP17.57■□□□□ 0.4
SSH1-201ENST00000326470 FNBP1Q96RU3 617 aa17.57■□□□□ 0.4
SSH1-201ENST00000326470 WDR83Q9BRX9 315 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms